Pantoea sp. SO10: FCN45_06880
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Entry
FCN45_06880 CDS
T06053
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pans
Pantoea sp. SO10
Pathway
pans00541
Biosynthesis of various nucleotide sugars
pans01100
Metabolic pathways
pans01250
Biosynthesis of nucleotide sugars
Module
pans_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FCN45_06880 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pans01005
]
FCN45_06880 (kdsB)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
FCN45_06880 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pans01005
]
Lipid A
FCN45_06880 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
QCP59113
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Position
1493411..1494160
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AA seq
249 aa
AA seq
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MSFVAIIPARYASTRLPGKPLVDIQGKPMVLHVMERARESGADRVIVATDHPDVAAAVTA
AGGEVCMTRVDHQSGTERLAEVIEKYQFADDTIIVNVQGDEPMIPAEIVRQVAGNLAQSE
AGMATLAVPITDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRERYARSREQIGDTLLR
HIGIYAYRAGFIRRYIAWEPCPLEHIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPEDL
ERVRLAMQG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttgccattattcctgcgcgttatgcttcaacccgtctgcccggcaaaccg
ctagtggatattcagggtaaaccgatggtgctacacgttatggaacgcgcccgtgaatcg
ggtgccgatcgcgtaattgtcgccaccgatcatccggatgtggctgcggcggtaacggcg
gctggcggcgaagtgtgcatgacgcgggtcgatcatcagtccggaactgagcgtttggcc
gaagtgatcgaaaagtatcagtttgccgacgacacgatcatcgttaacgtgcagggcgac
gagccgatgatcccggcggagattgtacgtcaggtggcaggtaatctggcgcaatctgaa
gccgggatggcgacgctggcggtgccgatcaccgatgcagaagaagcctttaacccgaac
gcggtgaaagtggtgatggacgccaaaggttatgcgctctacttctcacgcgccaccatt
ccctgggatcgcgagcgttatgcgcgttctcgcgagcagattggcgacacgctgctccgc
cacattggcatctacgcctatcgcgccggtttcatccgtcgctacatcgcgtgggaacct
tgcccgctggagcacattgagttgctcgaacagctgcgcgtgctgtggtacggtgaaaag
attcacgtcgcggtggcaaaaactatcccaagtgttggggtggatacgccggaagacctt
gagcgggttcgtctcgctatgcagggttaa
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