Pantoea sp. SO10: FCN45_09930
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Entry
FCN45_09930 CDS
T06053
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_09930
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FCN45_09930
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HemN_C
HTH_11
Peptidase_C101
AAA_34
HHD_RTEL1
Motif
Other DBs
NCBI-ProteinID:
QCP59676
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Position
2127779..2128600
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AA seq
273 aa
AA seq
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MTVLHSADFFPEGNYAIAIEPRVPQQAFPEHHHDFHEIVLVEQGSGIHVFNGQPQALSAG
CVCFVRDHDRHLYEQTENLCLTNVLYRSPASFRFLSGLQALLPREEEDHYASHWRINHKV
MAQALQIVTQMKQQDVWSLERHARQEQLFLQLLVLLREAAHNDQSQDQEARLHRLLDWLN
EHYSEEIVWDALADRFSLSLRTLHRQMKQQTGNTPQRYLNRLRLLQARHLLRHSDMRITD
IAYQCGFGDSNHFSTLFRREFGCAPRAERQQML
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttctacatagcgcagatttcttccctgaagggaattacgccatcgccatcgag
ccgcgtgtgccgcagcaggcatttccggagcaccatcatgatttccatgaaatcgtgttg
gtggaacaaggttctggcattcatgtgtttaacggtcagccgcaagctttatccgcagga
tgcgtgtgctttgtgcgcgatcacgatcgtcatctttatgagcaaacggaaaatttgtgc
ctgaccaacgtgctgtatcgcagtccggcgtcatttcgttttctctcgggtttgcaggcg
ctcctgccgcgcgaagaagaggatcactacgcgtcgcactggcgcattaatcacaaggtg
atggcgcaggcgctgcaaatcgttacgcagatgaagcagcaagatgtgtggtcgctggaa
cgtcacgcacgtcaggagcaactttttctgcaactgctggtgttgttgcgcgaagcggct
cacaacgatcaatcacaggatcaggaagcacgcttacatcggttgctcgactggctcaat
gagcactacagtgaagagattgtgtgggatgcattagccgatcgtttttcattgtcgctg
cgcactctgcaccgccagatgaagcagcaaaccggtaatacaccgcagcgttacctgaat
cggcttcgcctgttacaggcgcggcatttactgcgtcatagcgatatgcgcattacagac
atcgcctaccaatgtggatttggtgacagcaatcacttctccacgctgttccggcgggaa
tttggctgtgcgcccagagcggagcgccagcagatgctataa
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