Pantoea sp. SO10: FCN45_10875
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Entry
FCN45_10875 CDS
T06053
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_10875 (kdgR)
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FCN45_10875 (kdgR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_5
HTH_24
HTH_11
MarR
HTH_45
MarR_2
FUR
PadR
Dimerisation2-like_dom
Fe_dep_repress
Mga
Rrf2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
QCP59854
LinkDB
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Position
complement(2331205..2331996)
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AA seq
263 aa
AA seq
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MASSDNDKQPDSVSSVMKVFGILQALGEERDHGITELSQRVMMSKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIEMRELSRLTKETIHLGALEEDSIVY
IHKIDSLYNLRMYSRIGRRNPLHTTAIGKVLLAWRDRAEVQEILSEVEFRRSTAKTIVTA
EALLTVLDQVKVQGFGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEEAKNE
YVAMLHRAARNLSEQMGYHNYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagtgataatgataaacagccagactcggtttcatcagtgatgaaagtgttt
ggcattctgcaggcgctgggcgaagagcgcgatcacggcatcaccgaactgtcccaacgc
gtgatgatgtcaaaaagtaccgtttatcgctttttacagaccatgaaatcgcttggctat
gtggcgcaggaaggagaaagtgagaaatactcgctgacgctcaagctgttcgaactcggc
gccaaagcgttgcagaacgtcgatctgattcgtagcgccgatattgagatgcgtgagctg
tcgcgtcttactaaagaaaccattcacctcggcgcgctggaagaagacagcatcgtctac
atccataaaatcgattcactgtataacctgcgtatgtattcgcgcatcggccgccgcaat
ccactgcacaccaccgcgattggtaaagtgctgctggcatggcgcgatcgcgctgaagtg
caggagatcctgagcgaagtggaattccgccgcagtaccgcgaaaaccattgtcactgca
gaagcattgctgacggtgttggatcaggtaaaagtacagggatttggtgaagataatgaa
gagcaggaagagggcttacgttgcatcgcggtgccggtatttgaccgttttggcgtggtg
attgcggggctaagcatctcgttccccaccattcgtttttccgaagaagccaaaaatgag
tatgtggcgatgctgcatcgtgcggcgcgcaatctgtctgaacaaatgggctaccacaac
tatcctttctga
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