Pantoea sp. SO10: FCN45_11205
Help
Entry
FCN45_11205 CDS
T06053
Symbol
nirD
Name
(GenBank) nitrite reductase small subunit NirD
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
pans
Pantoea sp. SO10
Pathway
pans00910
Nitrogen metabolism
pans01100
Metabolic pathways
pans01120
Microbial metabolism in diverse environments
Module
pans_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pans_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
FCN45_11205 (nirD)
Enzymes [BR:
pans01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
FCN45_11205 (nirD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
NIR_SIR
Rubredoxin_C
Fer2_BFD
Pyr_redox_3
NIR_SIR_ferr
NAD_binding_8
DAO
GIDA
AlaDh_PNT_C
FAD_oxidored
FAD_binding_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QCP59918
LinkDB
All DBs
Position
complement(2400875..2404942)
Genome browser
AA seq
1355 aa
AA seq
DB search
MVQRLVVIGNGMAAMRMVETLLQRAPGRYAITVIGREPHGNYNRVLLSPVLAGEKAFADT
VIHEPAWYAAHQVQLLMGEEALQVDIPTRTVQTDQRTLHWDKLVFACGSRPRMPDLPGIH
RPQVQGFRTVRDVEAMLAQQGPVVLLGGGLIGVEAAAALRQRGRDVTLLHHRPWLLDRQL
DAKAGALLQQHLAQRGIRCRLGVTLQAIDAESVTLGDGAVIAAEQVVIAIGVLPEIALAQ
AAGVPCQRGILVNRQLQTALPHVYALGECCEISGETFGLIAPCLAQAAVLAAQLAGEPVA
DFHYQENGTRLKVSGIEMFSAGDISEGDAISSFDPLHQHYRRLFLRNGALRGVLLFGDSQ
AAGTLLPQLQQAAQVGINALFGLDDNTTQPSAAGSQMMSKPLLAVVGHGMVSHHFLEQLV
SRELHQHYHIVVYGDEPQMAYDRVHLTEYFNGKSADDLSLVSDNFFQQHGVELRSGCEVV
AIDSAKRSLRDASGAELTWDKLVLATGSVPFVPPVPGHDHARCFVYRTLADLDAIADCAR
NATRGVVIGGGLLGLEAANALKQLGLETHVVEFAPRLMAVQLDDGGAQMLRGKISALGVQ
VHTSKQTEAIESLPDGSLQLRFADGSLLATDLLVFSAGIRPRDALARAAGLQLGERGGIL
INDACATSAADVYAIGECALWQGQIFGLVAPGYQMARVLAAQLAQEELAFSGADMSTKLK
LLGVEVASFGDAHGRTADSQSYQWIDNPKGIYKKLVVCKDRKTLLGGVLVGDSADYASLL
QMMLNQLPLPEEPESLILPQLAGAPAKALGVAALPDSAQICSCHNVSKADICGAVQGGCG
DMAAIKSCTKAATGCGGCSALVKQVMEFQLASQGVEVKKDICEHFAYSRQELYHLIRVGN
ITTFEQLLQLNGRGQGCEVCKPLVGSLLASCWNDYLLKPEHLPLQDTNDRYFANIQKDGT
YSVVPRVPAGEITPQGLIAIGEVAARYDLYTKITGGQRIDLFGARLDQLPDIWEHLIAAG
FETGHAYGKSLRTVKSCVGSTWCRYGVQDSTAFAIALENRYKGLRAPHKIKMAVSGCTRE
CAEAQSKDIGVIATEKGWNLYVCGNGGMKPRHADLFASDLDDETLLRYVDRILMFYVRTA
DRLQRTSVWMDNMEGGLDYLRQVVIEDSLGIAVQLEQEMQRVVERYQCEWHSTLQDPSRR
ALFTATVNSEQPDETLNYVQVRGQRQPATADSIPVTTLPAEPWSAICLVDAIPPSAGMGA
RLGGQRVALFRLGEAIYALEDIEPGTQASVLSRGILGDVAGEPVVISPLYKQRVRLRDGQ
SLDNAEHQLRCWPVRVEGGKVWLGHQPIIALAAAS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgactggtagtgatcggaaacggcatggcggcgatgcgcatggtggaaacc
ttgctgcaacgtgcgccgggtcgctacgccatcacggtgattggccgtgagccgcacggc
aattacaaccgggtgctgctgtcgccggtgctggcgggcgaaaaagccttcgctgacacg
gtgatccacgaacccgcatggtatgcggcacatcaggtgcagttgctgatgggggaagag
gcgctgcaggtagatatccctacgcgcacagtacaaaccgaccagcgcacactgcactgg
gacaagctggtgttcgcctgcggttcgaggccgcgcatgccggatctgcccggcatccat
cgcccacaggtgcagggtttccgcacggtacgagacgtggaggccatgctcgcgcagcaa
ggtccggtggtgctgctgggcggcggattgattggcgtggaagccgcagcggcgctgcgt
cagcgtggacgtgacgtcacgctgctgcatcatcgtccgtggctgcttgatcgccagctg
gatgccaaagcgggtgcgctgttgcagcagcatctggcacagcgcggtattcgctgtcgg
ctcggcgtcactttgcaggccattgacgccgaaagcgtcacgctcggcgatggggcggtt
atcgcagcggaacaggtggtgatcgccatcggcgtgctgccggagatcgcgctggcgcag
gcggcgggcgtgccttgccagcgcggcattctggttaaccgtcaactgcaaaccgcgctt
ccgcatgtgtatgcgctgggtgagtgctgcgaaatcagcggcgaaacctttggcttgatt
gcgccttgtctggcgcaggccgccgtgctggcagcacaactggcgggtgaacccgtggcc
gactttcactatcaggaaaacggtacgcggctgaaagtcagcggcattgagatgttcagt
gcgggcgatatcagcgaaggcgacgccatcagcagctttgacccgctgcaccagcactat
cgccgactgtttttgcgcaatggcgcactgcgcggcgtgctgctgtttggcgacagccag
gcggcaggcacgctgctaccacaacttcaacaggccgcgcaggtgggcattaacgcgctg
ttcggtcttgacgacaacacaacgcagccaagcgctgcaggaagccagatgatgagcaaa
cctcttctcgccgtggttggacatggcatggtcagccaccattttctcgaacagctggtg
agtcgtgaactgcatcagcactatcacatcgtggtatacggcgacgagccgcagatggcc
tacgatcgcgtgcaccttaccgaatacttcaacggcaaaagcgcggacgatttgtcactg
gtcagcgataacttctttcagcaacacggcgtcgaactgcgcagcggttgtgaagtggtg
gcgattgacagtgcaaaacgcagcctgcgtgatgccagcggcgcggaattgacctgggat
aaactggtgctggcgaccggctcggtgccgtttgtaccgccggttcccggccacgatcac
gcgcgttgttttgtataccgcacactggccgatctggatgcgattgctgactgtgcccgt
aatgcgacgcgcggggtggtgattggaggcgggctgctcggactggaagccgccaacgca
ttgaaacagctcggtctggaaacccatgtggtggagttcgcgccgcgtctgatggcggtg
caattggatgacggcggcgcgcagatgctgcgcggcaaaatcagcgcgctgggcgttcaa
gttcataccagcaagcaaactgaagcgattgagagtctgccggatggcagcctgcagctg
cgttttgccgatggcagcctgctggcaacggacctgctggtattttcagcgggtattcgt
ccgcgtgatgcactggcgcgcgccgccggtctgcaactgggtgaacgcggcggcattctg
atcaacgacgcttgcgccaccagcgccgcagatgtctatgcgattggtgaatgcgcgctg
tggcaagggcaaattttcggtttggttgcgccgggatatcaaatggcgcgcgtactggcg
gcgcagctggcgcaggaagaactggcgttcagcggtgccgacatgagcacgaaactgaaa
ctgctcggcgtggaagtggcgtcatttggcgatgcgcacgggcgcaccgctgacagccaa
agttatcagtggatcgataatccaaagggcatctacaaaaaactggtggtgtgcaaagat
cgcaaaacgctgcttggcggcgtgctggtgggcgacagcgcagattacgccagcctgctg
cagatgatgctgaatcagttaccgttaccagaagagccggaaagcctgattttgccccag
ttagcgggtgcgccggctaaagcgctgggtgtcgcggcgttgccagacagcgcgcaaatc
tgctcgtgccataacgtcagcaaggcggacatttgcggggcagtgcagggcggctgcggt
gacatggcggcgatcaaaagctgcaccaaagcggcaaccggctgcggtgggtgtagcgca
ttagtcaaacaggtgatggagttccagctcgccagtcagggcgtggaagtgaagaaggat
atctgtgaacactttgcctactcgcgtcaagagctgtatcacctgatccgcgtcggcaac
atcaccacctttgagcagctattgcagctcaacggacgcggacagggctgtgaagtgtgc
aagccgctggtgggatcattgctggcatcatgctggaatgactacttactgaagcccgaa
catctgccgctgcaggataccaacgatcgctacttcgccaatatccagaaagatggcacc
tattcggtggtaccgcgtgtgccagccggtgaaattacgccgcaagggctaattgcgatt
ggtgaagtagccgctcgttacgatctctacaccaaaatcaccggcggtcagcgcatcgat
ctgttcggtgcgcggctcgatcagttaccggatatctgggaacacttaatcgcggcgggt
tttgaaaccggtcacgcttatggcaaatcgctgcgcacggtaaaatcctgcgtggggtca
acctggtgccgttacggcgtgcaggattctaccgccttcgccatcgcattagagaatcgc
tacaaagggctgcgcgccccgcacaaaattaaaatggcggtttccggctgcacgcgtgaa
tgcgctgaagcgcagagcaaggacattggcgtaatcgccacggaaaaaggctggaacctg
tatgtctgcggcaacggcgggatgaaaccgcgtcatgccgatttgttcgccagcgatctc
gatgatgaaacgctgctgcgctacgttgaccgcatcttgatgttctatgtgcgcaccgcc
gatcgtctgcagcgcaccagcgtgtggatggataacatggaaggcggactcgactacctg
cgtcaggtggtgatcgaagattcactcggtatagccgtgcaactggagcaggagatgcag
cgcgtggtggagcgctatcagtgcgaatggcacagcacgctgcaggatccttcgcgtcgc
gccttgtttaccgccaccgtcaacagcgagcagcctgacgagacgctcaactatgtgcag
gtgcgcggtcagcgtcagcccgcgacggcggacagcattcccgttaccacgttgccggca
gaaccctggagtgccatttgccttgtcgacgctatcccgccgtctgcgggcatgggtgcg
cggttaggcggtcagcgtgtggccttgttccgcttgggcgaggcgatttatgcgctggaa
gatattgagcccggcacgcaagccagcgtgctgtcgcgtggcattctcggcgacgtagcg
ggcgagccggtggtgatatcaccgctctacaagcagcgcgtgcggctgcgcgacggacaa
agtctcgataacgccgagcatcagctgcgctgctggccggtgcgcgtggagggcggcaaa
gtgtggctcgggcatcagccgattattgcgctggcggcggcctcatga
DBGET
integrated database retrieval system
