KEGG   Pantoea sp. SO10: FCN45_11240
Entry
FCN45_11240       CDS       T06053                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pans  Pantoea sp. SO10
Pathway
pans03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pans00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FCN45_11240 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pans02044]
    FCN45_11240 (tssM)
Secretion system [BR:pans02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FCN45_11240 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related
Other DBs
NCBI-ProteinID: QCP61560
LinkDB
Position
2411652..2413766
AA seq 704 aa
MRASLQHLLTHRLLWSLIGVTALSCVLWMLGPLWSWGDTRPLEPVLPRQLAVGLLYLLWL
LFQFIPALWRGWFNSKLLNRLQQMSQEELSDRQATETLLAQRFSEAALRLKRTQFGRRHQ
QSWLARFQSHYLYQLPWYVMIGAPGAGKTTALLNAGLQFPLTDSLGKAAIRGVGGTRHCD
WWFTDSAVLIDTAGRYALQESQRARDGAEWHSFINLLKRYRTRQPINGVIMTISVSDLLT
DSAEARHAQASALRERMAELHQHTGIHFPVYVMVTKTDLLKGFMSFYGTLSKPQRDAIWG
FTFPWEPGKPHKDDWHRSFSQQYQHLEQRLQQQLADVMAGERDLTQRADSFLFPQEFSSL
RALLNEYLDVVFSSHQEPIAWSARGLFFTSGTQEGLPFDRIMGELNRKLQLPHTGESSLA
AWNSVDRSSPIPGNKGQSFFIRDLLSDLVFRESGLAGSNRHWEYRNRLFHWIGYGVLTGA
LLLLSCLWLTSYIQNQRYLDQVAERLAPITTQSQQVIHQPADNIFDLLPFLNSLVKLPLS
ERFSLDNPPLTMRVGLYRGNQVSDAAWALYQNALKSLLLPRVAQQITNLLRDDPGTDNEY
SRNALRAYQMLYQPRNYDGEFLRGWLMQNLQRTLPDDVSARDLQQLDWHLSQLLDQQIQS
SPYARDNALMMRKLAENLKNAGDSSNTLAIAPHVVLQRLTRHSE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgcgcgcatcactgcaacatctgttaacccatcgcctgctgtggagcctgattggcgtc
acggcattgagctgcgtgctgtggatgctcggaccgctgtggagctggggcgatacgcgc
ccgctcgagccggtattgccgcgccagttagcggtgggtctgctgtatctgctctggctg
ctgttccagtttattcctgcactgtggcgcggctggtttaatagcaagttgctcaaccgt
ctgcagcagatgagccaggaagagttatccgatcgccaggccaccgaaaccctgctggcg
cagcgcttcagtgaagcagcgctgcgtttaaagcgcacccagtttggtcgtcgtcatcag
cagagctggctggcacgttttcaaagtcactacctttatcagctgccgtggtacgtgatg
attggcgcgccgggcgccggtaaaactaccgcactactcaacgctggcctgcaattcccg
ctcactgacagcctcggcaaagcggcaattcgcggcgtgggcggcacgcgccactgcgat
tggtggttcactgacagcgcagtgctgatcgataccgccggacgttacgcgttgcaggag
agccaacgcgcgcgcgatggcgcggagtggcacagttttatcaatctgctaaagcgctat
cgcacccgtcagccgatcaacggcgtgatcatgaccatcagcgtctccgatctgctgacc
gattcagccgaagcgcgccatgcgcaggccagcgcgctacgtgaacgcatggcggagctg
catcagcacaccggcattcacttcccggtgtatgtgatggtgaccaaaaccgacctgctg
aaagggtttatgagtttttacggcacgctcagcaagccgcagcgcgatgcgatttggggc
ttcactttcccgtgggaaccgggcaaaccgcataaagacgactggcaccgcagcttcagc
cagcaatatcagcacttagagcagcgtttacagcagcagttggccgacgtcatggctggc
gagcgcgatctcacccagcgcgccgacagcttcctgttcccgcaagagttcagttcgttg
cgtgcgctgctgaatgagtatctcgatgtggtgttttccagccatcaggagccgatcgcc
tggtcggcgcgcggcctgttcttcaccagcggcacgcaggaaggtttaccgtttgaccgc
atcatgggcgaactgaaccgcaagctgcagctgccgcataccggcgaaagcagcctcgcg
gcgtggaatagcgtcgatcgcagcagtccgatccccggcaacaaaggacaaagtttcttt
atccgcgatttactgagcgatttagtgttccgcgaaagcggcctggcgggcagcaatcgc
cattgggaataccgcaaccgcctgttccactggatcggttatggcgtgctgaccggcgca
ctgctgctgctctcctgtttgtggctcaccagctatattcagaatcagcgttatctggac
caggttgccgaacgcctcgcgccgatcaccacccagagtcagcaggtgatccatcagccc
gccgataatatttttgatctgctacccttcttaaatagcctggtgaaactgccgctctcc
gagcgtttttccctcgacaatccaccgcttaccatgcgcgttgggctgtatcgcggcaac
caggtcagcgatgcggcgtgggcgctttatcaaaatgcgcttaagtctttactgctgccg
cgcgtggcgcagcagatcaccaatttgctgcgtgacgatcctggcaccgataacgagtac
agtcgcaatgcgttgcgggcctatcagatgctctatcagccgcgcaattatgacggcgag
ttcctgcgtggctggctgatgcaaaacctgcagcgcacgctgccggatgatgtcagcgcg
cgcgatttgcagcagctcgactggcatctgagccagctgctggatcagcaaattcagtct
tcgccgtatgcacgtgacaatgcgttgatgatgcgcaagcttgcggagaatctgaaaaat
gccggtgacagcagcaacacgctggcgattgcgccgcacgttgttttgcagcgattgacc
agacacagtgagtaa

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