Pantoea sp. SO10: FCN45_11370
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Entry
FCN45_11370 CDS
T06053
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_11370
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FCN45_11370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_7
HTH_38
Crp
HTH_3
HTH_Tnp_ISL3
DUF3853
HTH_Crp_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QCP59944
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Position
complement(2437925..2438905)
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AA seq
326 aa
AA seq
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MSIQKIARLAGVSVATVSRVLNNSDTVKALNREKVLHAIKASNYQPNLLARQLRTARSSM
ILVMVSDISNPFCAELVKGIEEQAEKNSYRILLCNSGSDIERSRSSLQLLAGKMVDGIIT
MDAFSKLPELAQLIGETPWVQCAEYADAGDVSCVGIDDVQASKHVVAFLAGRGRQRIALI
NHDLSYKYAQLRQAGYQQQLIHEARSWQAITYATELSFNAGKQAMEALLRAPERPDAVFA
VSDTLAAGALSAIHAAGLRVPQDIAVTGFDGSDLAEMVTPPLSTLAQPSRAMGRKAFTLL
LNKIDQPDSPAQRIMMDWHFVARAST
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccaaaaaatcgcccgcttagcgggcgtttctgtggcaacagtttcacgggta
ctgaataacagcgatacggtaaaagcgctgaatcgtgagaaagtcctgcacgctattaaa
gcgagtaattaccagccaaatttattagcgcgtcagttgcgtactgcgcgtagctcaatg
attctcgtgatggtgtcggatatctccaatcccttttgcgccgagttggtgaaaggcatt
gaggagcaggcggagaaaaacagttatcgcattctgttgtgcaattctggctcagacatc
gagcgctcccgctccagtttgcaattgctggccgggaaaatggtggatggcattatcact
atggatgcgttcagtaagttgccagaactggcgcagctgattggcgaaacgccgtgggtg
caatgcgcggaatacgccgatgccggtgatgtctcctgcgtgggcattgatgatgtgcag
gcatcaaagcacgtcgtggcgtttctggcgggcaggggacgacagcgtattgccttaatc
aaccacgatctcagctataaatatgcgcagctgcggcaggcgggttatcagcagcaactt
atccatgaagcacgcagctggcaggccatcacgtacgccaccgagctgagttttaatgcc
ggtaaacaggcgatggaagccttgctgagagcgcccgagcgtccagatgccgtgttcgcc
gtgtcggataccttagcggcgggcgcgctgtcagccattcatgccgccgggctacgcgtg
ccgcaggatatagcggtgacgggatttgatggatccgacctcgccgaaatggtcacgccg
ccgctgagcacgctggcgcagccgtcgcgcgctatggggcgcaaggcgtttaccttgctg
ctgaataagatcgatcaacctgattcgccggctcaacgcattatgatggactggcacttt
gtggcgcgcgccagtacttaa
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