Pantoea sp. SO10: FCN45_12140
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Entry
FCN45_12140 CDS
T06053
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pans
Pantoea sp. SO10
Pathway
pans02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCN45_12140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_9
Motif
Other DBs
NCBI-ProteinID:
QCP60086
LinkDB
All DBs
Position
2601884..2608732
Genome browser
AA seq
2282 aa
AA seq
DB search
MNDLLARSPVFYRESADGRLVFGNKTALEPGGFIELVIGTDTFRVPVDDKGFYRWEAPTP
YADGEYSFSIRHFDAAGNRSTPTLGTVIVDTSAPAAPELLNLYDDQGDKTGSFDAGKATD
DKRPTLTGIAQKGSTVYLLNDKNEKIGSAVADKVTGKWVMEPAQDLKDGSNSLRLMAEET
FGKQLRAGTPSAPFSIIIGNGTAQLETTADAAAAPVSDTAPAAAEPLARSQTFYRESADG
RLAFGNKTALEPGGFIELVIGTDTFRIPVDDKGFYRWEAATPYADGEYSFSIRHFDAAGN
RSTPTLGTVIVDTTPPSAPDLINLYDDQGAVTGSFDAGKATDDKRPTLTGIAQKGSTVYL
LNDKNEKIGSAVADKVTGKWVMEPSQDLNDGVNSLRLMAEETFGGKLRAGAPSEAFDIVI
GGDDVNVTITDALDDAGSFTGSLGHGALTDDATPTLRGEVLAASTVIVYYRLAGSPTWAG
SATATVSGETWSWTPGSNLPDGHYEFQASTGEVASVLFELEIAGTSGIAQRTRIESVTDD
FGPVTGPLANGAMTDDATPTFQGRAEANSQVVIRYTLAGGAAASVTVNADSTGHWRWTPG
NDLASGQWTFDVKSQGQSGWNDSFTLTINPDADRNATIDSALDNVGPVTGSLASGATTDD
TTPTLRGSGPANSEIALRYKLGNGGYTSIKVNVDSSGHWTWTPSALAKGSWTFEVQKPGQ
SDWSSFTLTVDPTVDRIATINGAYDDFGDVQGLVTNGGITDDATPTLTGSGPANSVISLR
YRLGSGEYASTTVNVDANGNWTWTPPPLANGSWTFEVQRSGQSGWKSYKLTIDPTVDRKP
TIDSAWDDVGPTTGLINNGGTTDDSTPTLRGTGPANSTILLRYARLTSVYEGTIKVDASG
NWTWTAPQLEDGNWIFEVKKEGQYEWSRYELTVDSSADRYPTIDSALDNAGPVTGSLASG
SSTDDSTPTLRGSGPANSTITLRYKLGSGEYASTTVNVDNAGHWTWTPSALAKGNWTFEV
QNAGQSGWNSFTLTIDPDLDRYPTIDSAWDDFGPVTGSLSSGSSTDDTTPTLRGSGAANG
EITLRYKLGNGGYTYITVNVDSSGHWTWTPSALAKGSWTFEVQKTGQSDWSSFTLTVDPT
LDRNATINSAYDDFGTVKGIIANGGITDDATPTLNGSGPANSVISLRYRLGSGEYASTTV
NVDANGNWTWTPSALASGKWTFEVQKPGQSGWSSFTLTIDPTVDRKPTIDSAWDDVGPTT
GLVNNGGTTDDSTPTLRGTGPANSTILLRYFRLATMFEGTIKVDASGNWTWTAPQLEDGN
WTFEVKKEGQSQWSSYELTIDSDADRYPTIDSALDNAGPVTGSLSSGSSTDDTTPTLRGS
GPANSTITLRYKLGSGEYASTTVNVDSAGKWTWTPSALAKGNWTFEVQKAGQSGWSSFTL
TVDPALDLKPTIDSAWDDFGAVTGSLNSGDSTDDSTPTLRGKGVAGSVIYFQSGTAGGSW
YDVGSTVVKADGSWEWTSPALSRNGTWEFRAKASHGGVDSTWTGKFVLIYTAAEAPAITD
ALDNAGPVTGSLASGGSTDDSTPTLRGSGPANSTITLRYKTDGGSYASTTVNVDSAGHWT
WTPSALAKGSWTFEVQNAGQSGWNSFTLTIDPDLDRYPTIDSAWDDFGPVTGSLSSGSST
DDSTPTLRGSGPANGEITLRYKLGSGEYASTTVNVDNSGHWTWTPSALAKGSWTFEVQKP
GQSGWSSFTLTVDPALDLKPSIDSGWDDFGAVTGSLKSGDATDDSTPTLRGKGVAGSVIY
FQSGTWDGAWENAGSTVVKADGSWEWTSPALSHSTTWEFRALARLDGAESDWSGKFVLEY
NNPAPTITDAFDDFGAETGNLASGDTTDDSTPTLRGTAPADSVVMIRAQHASGETTYSVK
ADADGKWSWTPDKGLAKGDWDFQVKNSAMDNWGDTFKLNVSQGYPEGAGILNFEELPLGS
IKDGKKFAFFNQLSFNFYRASGFGIPNRSEIGKIVKTPDEAPDNFGKQSLIFYKPWMLEI
GRSDINNDIKEAGATIWNNGTEDAEFVLLYGSTIEVDRILVKAGESYFFNLSDYGLDNVD
RVVIKTIKFSENIYIDNIYGTLQKMNVLNDTEDGVNSILHKLDGVDALTEHPITGSEMQI
DTLQLTGKDQLLDLSQHQAEIQSVEIFDIRGSGDNTLKIDLDALLHYGEKDLFIEDGKTQ
LMVNGGAGDVVQLKDILPEGSDISEWQHQQGTVTVAGVEYEVYSHGDDAELLVQQGVKTE
LI
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattagcccgcagcccggtgttctatcgcgaaagcgccgacggcagactg
gtgttcggtaacaaaaccgcgctggagcccggcggctttatcgagctggtgattggcacc
gacaccttccgcgtcccggtggacgacaaaggcttttaccgctgggaggcgccgacgccc
tacgccgacggcgagtacagcttctccatccgccactttgacgccgccggcaaccgcagc
acgccgaccctcggcaccgtgattgtcgataccagcgcacccgccgcccctgaactgctg
aacctctacgacgaccagggcgacaaaaccggcagctttgacgcaggaaaagccaccgac
gacaaacgcccgacgctgaccggcatcgcgcagaaaggcagcaccgtttacctgctcaac
gacaaaaatgaaaaaatcggcagcgcggtggcggacaaggtcaccggcaagtgggtaatg
gagccggcgcaggacttaaaagacggcagcaacagcctgcgcctgatggccgaagagacc
tttggtaaacagttgcgcgccggcacgccatctgcgccgttcagcatcatcatcggcaac
ggcaccgcgcagcttgaaaccaccgctgacgcggccgccgcgccagtcagcgacaccgct
cctgcggccgccgaaccgctggcccgcagccagaccttctaccgcgaaagcgccgatggc
agactggcgttcggtaataaaaccgcgctggagcccggcggctttatcgagctggtgatt
ggcaccgacaccttccgcatcccggtggacgacaaaggcttttaccgctgggaggcggcg
acgccctacgccgacggcgagtacagcttctccatccgccactttgacgccgccggcaac
cgcagcacgccgaccctcggcaccgtgattgtcgacaccaccccgccatccgcgccggac
ctgattaacctttacgacgaccagggcgccgtgaccggcagctttgacgccggcaaagcc
accgacgataaacgcccgacgctgaccggcatcgcgcagaaaggcagcaccgtttacctg
ctcaacgacaaaaatgaaaaaatcggcagcgcggtggcggacaaggtcaccggcaagtgg
gtgatggagccgtctcaggacctgaacgacggcgttaacagcctccgcctgatggccgaa
gagaccttcggcggcaagctgcgcgccggcgcgccttctgaagcgtttgatatcgtgatt
ggtggcgacgacgtcaacgtcaccatcaccgacgcgcttgacgacgcgggcagctttacc
ggctcgctcggccacggcgcgctcaccgacgacgccaccccgaccctgcgcggcgaggtc
ttagccgccagcaccgttatcgtttactaccgcctcgccggcagcccgacctgggccggc
agcgccaccgccaccgtcagcggcgagacctggagctggacgccgggcagcaacctgccc
gacggccactacgagttccaggccagcaccggcgaggtcgcctcggtgctgttcgaactg
gaaatcgccggcacgtccggcatcgcccagcgcacccgcattgagtccgtgacggacgac
tttggccccgtcaccggcccgctggcaaacggcgcgatgaccgatgacgccacgccgacc
ttccagggccgcgcggaggccaacagccaggtggtgatccgctacacgctggcgggcggc
gcggccgcctccgtcacggttaacgccgacagcaccggccactggcgctggacgccgggc
aacgacctggccagcggtcagtggacgtttgacgtgaagtcgcagggccagtccggctgg
aacgacagcttcacgctgaccatcaacccggacgccgaccgcaacgccaccattgacagc
gcgctcgacaacgtcgggccggtcaccggcagcctggcgagcggcgccaccaccgacgac
accacgccgaccctgcgcggcagcggcccggcgaacagcgagattgcgctgcgctacaag
ctgggcaacggcggctacacctccatcaaagtgaatgtggacagcagcggccactggacg
tggacgccgtccgcgctggcgaaaggcagctggacctttgaggtgcagaagcccggccag
agcgactggagcagcttcacgctcaccgtcgatcccaccgtggatcgcatcgccaccatt
aacggcgcctacgatgattttggtgacgtgcaggggctggtaactaacggcggcatcacc
gacgacgccaccccaaccctgacaggcagcggcccggcgaacagcgtaatttcgctgcgc
tacaggctgggttcgggcgagtacgcctccaccaccgtgaacgtggatgcgaacggcaac
tggacgtggacgccgccgccgctggccaacggcagctggacgtttgaggtgcagcgttcc
ggccagagtggctggaaaagctataagctgaccatcgatccgaccgtagaccgtaaaccg
accatcgacagcgcctgggatgacgtgggccccaccaccggcctcatcaacaacggcggc
accaccgacgacagcacgccaaccctgcgcggcaccggtccggccaacagcaccatactg
ctgcgatacgcccgcctgaccagcgtgtatgaaggcaccattaaagtggacgccagcggt
aactggacctggaccgcgccacagctggaggacggcaactggatctttgaggtgaaaaaa
gaggggcaatatgagtggagccgctatgagctgaccgttgactccagcgccgaccgctac
ccgaccatcgacagcgcgctggacaacgccggcccggtgaccggaagcctggcgagcggc
agcagcaccgacgacagcacgccaaccctgcgcggcagcggcccggcgaacagcaccatc
acgctgcgctataagctgggttcgggcgagtacgcctctaccaccgtgaacgtggacaat
gcaggccactggacgtggacgccgtccgcgctggcgaaaggcaactggacctttgaggtg
cagaacgccggccagagcggctggaacagcttcacgctgaccatcgatccggacctggac
cgctacccgaccatcgacagcgcctgggacgacttcgggccggtgaccggcagcctgagc
agcggcagcagcaccgacgacaccacgccaaccctgcgcggcagcggcgcggcgaacggc
gagattacgctgcgctataagctcggcaacggcggctacacctacatcacggtgaacgtg
gacagcagcggccactggacgtggacgccgtccgcgctggcgaaaggcagctggaccttt
gaggtgcagaaaaccggccagagcgactggagcagctttacgctcaccgtcgatcccacg
ctggaccgcaacgcgaccattaacagcgcctacgatgattttggaaccgttaagggcatt
atcgctaacggcggcatcaccgacgacgccaccccaaccctgaacggcagcggcccggcg
aacagcgtgatttcgctgcgctacaggctgggttcgggcgagtacgcctccaccaccgtg
aacgtggatgcgaacggcaactggacctggacgccgtccgcgctggccagcggcaaatgg
acctttgaggtgcagaaacccggccagagcggctggagcagcttcacgctgaccatcgat
ccgaccgtcgaccgtaaaccgaccatcgacagcgcctgggatgacgtgggccccaccacc
ggcctcgttaataacggcggcaccaccgacgacagcacgccaaccctgcgcggtaccggc
ccggccaacagcaccattctgctgcgctatttccgcctggccaccatgtttgaaggcacc
attaaagtggacgccagcggcaactggacgtggaccgcgccacagctggaggacggcaac
tggacctttgaggtgaaaaaagaggggcagtcgcagtggagcagctatgagctgaccatt
gactctgatgccgatcgctacccgaccattgacagcgcgctggacaacgccggcccggtg
accggcagcctgagcagcggcagcagcaccgacgacaccacgccgaccctgcgcggcagc
ggcccggcgaacagcaccatcacgctgcgctacaagctgggttcgggcgagtacgcctct
accacggtgaacgtggacagtgcaggcaagtggacgtggaccccgtccgcgctcgccaaa
ggcaactggacctttgaggtacagaaggccggccagagcggctggagcagcttcacgctg
accgtcgatccggcgctggacctgaagccaaccatcgacagcgcctgggacgattttggc
gcggtcaccggcagcctgaacagcggtgacagcaccgacgacagcacgccgaccctgcgc
ggcaagggcgtggccggcagcgtgatttacttccagagcggcacggcgggcggctcgtgg
tacgacgtcggcagcaccgtggtgaaggccgacggcagctgggagtggacctcgccggcg
ctgagcagaaacggcacctgggagttccgcgccaaagccagccacggcggcgtcgacagc
acctggaccggcaagttcgtcctcatctacaccgccgcggaggcgccggccatcaccgac
gcgctggacaacgccggcccggtgaccggcagcctggcgagcggcggcagcaccgacgac
agtacgccaaccctgcgcggcagcggcccggcgaacagcaccatcacgctgcgctacaaa
acggacggcggcagctacgcctccaccacggtgaacgtggacagtgcaggccactggacg
tggacgccgtccgcgctggcgaagggtagctggacctttgaggtgcagaacgccggccag
agcggctggaacagcttcacgctgaccatcgacccggacctggaccgctatccgaccatc
gacagcgcctgggacgacttcgggccggtgaccggcagcctgagcagcggcagcagcacc
gacgacagcacgccgaccctgcgcggcagcggcccggcgaacggcgagattacgctgcgc
tacaagctgggttcgggcgagtacgcctccaccacggtgaacgtggacaattcaggccac
tggacgtggacgccctccgcgctcgccaaaggcagctggaccttcgaggtgcagaagccc
ggccagagcggctggagcagcttcacgctcaccgtcgatccggcgctggacctgaagccg
agcatcgacagcggctgggacgatttcggcgcggtcaccggcagcctgaagagcggtgac
gccaccgacgacagcacgccgaccctgcgcggcaagggcgtggccggcagcgtgatttac
ttccagagcggcacgtgggacggcgcgtgggaaaacgcgggcagcaccgtggtgaaagcc
gacggcagctgggagtggacctcgccggcgctgagccacagcaccacctgggagttccgg
gcgttagccagactcgacggcgctgagagcgactggagcgggaagtttgtgctggagtac
aacaacccggcgccgaccattaccgacgcgtttgatgattttggtgccgaaaccggcaac
ctcgccagcggtgataccaccgatgacagcacgccaaccctgcgcggcactgcgccggcc
gacagcgtagtgatgatccgtgcgcagcatgcgtcgggtgagacaacttacagcgtgaag
gcggatgcggatggtaagtggagctggacgccggataaaggactggcgaaaggagactgg
gatttccaggtaaaaaactctgcaatggataactggggagatacttttaaattaaatgtt
tcgcaaggttatcctgagggagcaggtattctcaattttgaagagttaccattaggttca
attaaagacggaaaaaaatttgctttcttcaatcaactttcgtttaatttttatcgggcc
tctggctttggtatacctaatcgctcagaaattggtaaaatagttaaaacaccagacgaa
gcgccggataatttcggcaagcaatccttaatcttttataagccttggatgcttgaaatt
ggtagatcagatataaataatgatataaaagaggctggagcaactatatggaataatggc
acagaagatgctgaatttgttttactttatggttcgacaatagaagtagatagaatactt
gttaaagctggcgaatcatatttctttaacctttcagattatggccttgataatgttgat
agggtagttataaaaactattaaattctcggaaaacatatatatagacaacatttatggc
acgctacaaaaaatgaatgtcttaaatgacactgaagatggagttaattcaattctacac
aaactcgacggcgtcgacgcattaaccgaacaccccatcaccggcagtgaaatgcaaatt
gataccctgcaattaaccggtaaagatcagctgctcgatttatctcaacatcaggcagag
attcaatcggtggagatatttgatattcgcggcagcggggataatacgctgaaaatcgat
cttgatgcgctgctgcattacggcgaaaaagatctgtttatcgaagacggtaaaactcag
ctgatggtgaatggcggtgctggcgacgtggtgcagctgaaagatattctgccggaaggt
agcgatatcagcgaatggcagcatcagcagggcacggtgacggttgcgggcgtggagtat
gaggtttacagccacggcgatgacgcggaactgctggtgcagcagggggtgaaaaccgag
ctgatttaa
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integrated database retrieval system