Pantoea sp. SO10: FCN45_13560
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Entry
FCN45_13560 CDS
T06053
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_13560
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FCN45_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QCP60349
LinkDB
All DBs
Position
complement(2933724..2934593)
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AA seq
289 aa
AA seq
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MADYQTFNMLQRHKAQLRDSVQLSSGIKLAAWFNSGDRVTNLSDHHTLSLYTADGYETWH
KTQNGWRNGGGPDRFCLMPSGVESVWDIRADLSFVHLYCTDEHLRHLGEQIWDRSPSQLN
LHEKIFAADDRITQLYRHFLLSTDWQQPANQLMLSSASTLLMTHLLQRYSDVQWQAPQVR
GGLAPAVLRRVMAYIDAQLDQPLTLAQLAAEAALSEYHFARMFRSSVGEAPHQYVMRRRM
DAALQLLKFSRLTLTEIAMRCGFHSSSHFSNRFRQLHGVTPSAWRHDQV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggccgattaccagaccttcaacatgctgcagcgccacaaagcgcagctgcgcgacagt
gtacagttgtcgagcggcattaagctggcggcctggtttaacagcggcgatcgcgtcacc
aatcttagcgatcatcacacgctgagcctgtataccgcagacggctatgaaacctggcat
aaaacccaaaacggctggcgcaacggcggcggcccggatcgcttttgcctgatgcccagc
ggggtagaatcggtgtgggatattcgcgccgatttgtcgtttgtgcatctctattgcacc
gacgaacatctgcggcatttgggcgagcagatttgggatcgcagtccgtcgcagctcaat
ctgcatgaaaagatcttcgcggcggacgatcgcatcacccaactttatcgccatttcttg
ctgagcactgactggcaacagccggcgaaccaattgatgctcagcagcgcatcaacgttg
ctgatgacgcatctgctgcaacgctacagcgatgtgcaatggcaagcgccgcaggtgcgt
ggcggactggcgcccgccgtgttgcggcgagtcatggcgtatattgatgcgcagctcgat
cagccattaacgctggcgcaactggcagccgaagcggcgctgagcgaataccattttgcc
cgcatgttccgcagcagcgttggcgaggccccgcatcaatatgtgatgcgtcgccgcatg
gatgctgcgctgcagctgctgaaattcagccgtttaacgctaacagaaatcgcaatgcgc
tgcggttttcactcctcaagtcacttcagtaaccgcttccgtcagctgcatggcgtgacg
ccatcggcatggcgccacgatcaagtctga
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