Pantoea sp. SO10: FCN45_14460
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Entry
FCN45_14460 CDS
T06053
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCN45_14460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_14460
Enzymes [BR:
pans01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FCN45_14460
DNA repair and recombination proteins [BR:
pans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCN45_14460
Prokaryotic type
FCN45_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
QCP60516
LinkDB
All DBs
Position
3124273..3124950
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AA seq
225 aa
AA seq
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MAEKLTWHDVLAEEKEKPYFVETLKAVANERAAGVTVYPPQKDVFNAFRLTELGDIKVVI
LGQDPYHGPNQAHGLAFSVLPGVAIPPSLLNMYKELEQDMPGFVRPTHGFLESWATQGVM
LLNTVLTVEASKAHSHARFGWETFTDNVISAINQHREGVIFLLWGSHAQKKGSIIDTQRH
HVLKAPHPSPLSAHRGFFGSKHFSQANALLSQSGQSPIDWMPVLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaagctgacctggcacgacgtgctggctgaagagaaagagaaaccttacttc
gtggaaacgctgaaagcggtggccaatgaacgcgctgccggcgtaacggtgtatccgccg
cagaaggatgtgtttaatgcctttcggctgaccgaactgggcgatatcaaagtggtgatt
ttggggcaggatccctatcacggcccgaatcaggcgcatggtctggctttttccgttctg
cccggcgtggcgatcccgccatcattactgaatatgtacaaagagctggagcaagatatg
cctggctttgtgcgtcctacgcacggttttctcgaaagctgggcaacacaaggcgtgatg
ctgttaaacaccgtgttaacggtggaagccagtaaggcgcattcgcacgcgcgctttggc
tgggaaacctttaccgataacgtcatcagcgccatcaatcagcatcgcgaaggggtaatt
ttcttgctgtggggttcgcatgcgcagaagaaaggcagcatcattgatacgcaacgtcat
catgtattgaaagcgccacacccttctccgctctccgcgcatcgtggcttttttggcagt
aaacacttctcgcaggcgaatgcgctgctcagtcaatcgggccagtcaccgattgactgg
atgccggtgttgccttaa
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