Pantoea sp. SO10: FCN45_14905
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Entry
FCN45_14905 CDS
T06053
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pans03016
]
FCN45_14905 (truD)
Enzymes [BR:
pans01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FCN45_14905 (truD)
Transfer RNA biogenesis [BR:
pans03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCN45_14905 (truD)
Prokaryotic type
FCN45_14905 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QCP60589
LinkDB
All DBs
Position
complement(3212150..3213193)
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AA seq
347 aa
AA seq
DB search
MSELHYLHGVPTATGVIKANPEDFVVIEDLGYPYDGEGEQLLVRIRKIGCNTRFVAEAIA
KFLGVPVRDLSYAGMKDRHAVTEQTLCFRVPGNGMPNLAGFQLEGVEILQVIRHKRKLRT
GALAGNAFRLVVRQISDRREVDARLQQIQQRGVPNYFGEQRFGRGGNNLTQAKQWAKETF
RPRDRNMKGLLLSATRSHLFNQVTSARLQRDGALDVVQVGDAVQLAGRGSWFVAQAEELP
DVQQRIDNHQLRITAPLPGRGDAGPQGDALLFEQQSLAGAEELITLLERERVDAARRAML
VVPKDLRWEWWDDVTLEMQFWLPAGSFATSVVRELLQQEGNDADIAE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgcattacctgcacggcgtgccgactgccaccggcgtcatcaaagccaat
cccgaagatttcgtggtgattgaagatcttggctatccctatgatggcgaaggtgaacag
ctgttggtgcgcatccgtaaaattggctgcaatacgcgctttgtcgctgaagccatcgcc
aaatttctcggcgtgccggtgcgcgaccttagctatgccggcatgaaagatcgtcatgca
gtcaccgagcaaacgctctgtttccgcgtaccgggcaatggcatgccgaatctggccgga
ttccagctggaaggcgttgaaatcctgcaggtaattcgccacaaacgcaaactgcgtacc
ggcgcgctggcgggcaatgcgttccgcttagtggtgcgtcagatctccgatcgccgtgaa
gtcgacgcacgtttacaacagattcaacagcgcggcgtgccgaactactttggtgagcag
cgctttggtcgtggcggcaacaacctgacgcaggcgaaacagtgggcgaaagagacattc
cgtccgcgcgatcgcaatatgaaaggtttgctgttgtcagcgacccgcagccatctgttt
aatcaggtaaccagcgcacgtttgcagcgtgatggcgcactggatgtggtgcaggtgggc
gatgcggtacagctggccggtcgcggcagctggttcgtggcgcaggcggaagagttgcct
gacgtgcagcagcgcatcgataatcatcaactgcgtatcactgcgccgctgccgggtcgc
ggtgatgcgggtccgcaaggcgacgcgctgctttttgagcagcagagcctggcaggcgca
gaagaattgattacactgcttgagcgcgagcgggttgatgccgcgcgtcgagcaatgctg
gtggtgccaaaggatctgcgctgggaatggtgggacgatgtgacgctggagatgcagttc
tggctgcccgccggcagttttgccaccagcgtggtgcgtgagcttctccaacaagaaggt
aacgatgcggatattgctgagtaa
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