Pantoea sp. SO10: FCN45_15155
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Entry
FCN45_15155 CDS
T06053
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FCN45_15155 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_15155 (recD)
Enzymes [BR:
pans01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FCN45_15155 (recD)
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCN45_15155 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
DEAD
PhoH
T2SSE
AAA_33
AAA_16
AAA_28
CbiA
UvrD_C
ABC_tran
DO-GTPase1
TrwB_AAD_bind
Zeta_toxin
AAA_24
MukB
ResIII
SRP54
ZapD
AAA
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QCP60632
LinkDB
All DBs
Position
complement(3263718..3265556)
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AA seq
612 aa
AA seq
DB search
MSGMTALLAQAAELRLLRSLDVQFAQLLADDDQPARLLLAACLSAEAGDGHVCLPLSQLS
RDNLFKGRHAELAQAIWQAAGEPQDWPAILAGWSALSSSDCAAPIVLSEGRLYLHRLWHN
EGQVARFFQSQSTAQPFAPERVREVLDQLFGSEPDNWQKIAAAVALTQKTAVISGGPGTG
KTTTVAKLLAALIRLSEGALRIQLAAPTGKAAARLTESLGKALQKLPVSEAERQRFPADA
TTLHRLLGAQPETQRLRYHAGNPLHLDVLVVDEASMVDLGMMANLIAALPAQARVVFLGD
RDQLASVEAGAVLGDICRCAEAGYSPMRAAQLSELTGSGVAGIDDSSAPAVRDAICLLRK
SYRFDANSGIGQLAAAVNAGDAKAVEAAFKAGFSDITRQPLQDADAYQAMLTEIAAGYQP
FLKLIRQRADPAEIIAAFGRYQLLCALREGPFGVQGLNQRIEQKLMQLQLIRRPTGGSRW
YQGRPVMVTRNDSALGLFNGDIGITLFDEEGLLKVFFPLPDGSIKAVQPSRLPTHDTAWA
MTVHKSQGSEFDHTALVMPAQFLPVLTRELIYTAITRARKQLTLYSDDGVFRRAVQLRTQ
RRSGLLERLSGE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtatgaccgcgcttttagcacaggcggctgagctgcgtttgctgcgctcgctg
gatgtccagttcgctcaactgctggctgatgatgatcaaccggcgcgtttgctgctggcg
gcctgcctgagcgcggaagcgggagatgggcatgtctgtttgccgttatcacagctgagc
cgcgacaacctgtttaaagggcgtcatgcggagctggcgcaggctatctggcaagcggca
ggcgaaccgcaggattggccggcaattttagccggctggtcggcgctgagtagcagcgat
tgcgcagcacccatcgtgctgagcgaaggccgtctctatttgcatcgcctttggcacaac
gaagggcaggtggcgcgtttctttcagtcacagtcgacagcacagccttttgcgcctgaa
cgggtcagggaagtgctggatcagctgtttggcagcgagccggataactggcagaagatt
gcggctgcggtggcgctgacgcagaaaactgcggtgatctcgggcggtcccggaaccgga
aaaaccaccacggtggcaaaactgctggcggcactgatccgtcttagcgaaggcgcgtta
cgtattcagttggctgcgccgaccggcaaagcggcggcgcgtctcaccgaatcgctgggc
aaggcgctgcaaaagttgccggtgagcgaggcggagcggcagcgctttccggccgatgcc
accacgctgcaccgcttgttaggcgcgcagccggaaacgcagcgcctgcgctatcacgcc
ggcaatccgctgcatctggatgtgctggtggtggatgaagcctcaatggtcgatctcggc
atgatggcgaatttgattgccgcattgccagcgcaggcgcgcgtggtgttcctcggcgat
cgcgatcagctggcatcggtggaagcgggcgcggtgctcggtgatatctgtcgctgtgcc
gaagccggttacagcccgatgcgcgctgcgcagctgagtgagctcaccggcagcggggtg
gcgggcatcgatgacagcagcgcacccgcggtacgcgacgcgatttgcctgctgcgtaaa
agctaccgctttgacgccaactccggcattggccaactggccgcagcggttaacgccggt
gatgcaaaggcggttgaagccgcattcaaggctggtttcagcgatatcacccgtcaacct
ttgcaggatgctgatgcgtatcaggcgatgctgacagagattgccgccggttatcagccg
ttcctgaaactcattcgccaacgcgctgatcctgctgagattatcgcggcgtttggccga
tatcagctgctgtgcgcactgcgtgaagggccgtttggcgtgcagggattgaatcaacgt
attgagcagaagctgatgcagttgcagctgattcgtcgtccaaccggcggcagtcgctgg
tatcagggacgtccggtgatggtgacgcgtaatgacagcgcattgggcctgtttaacggc
gatatcggcattacgctgtttgatgaggaaggtctgctgaaggtgttcttcccgttgccg
gatggcagcatcaaagcggtgcaaccgagccgcttgccgacgcacgataccgcgtgggcg
atgacggtgcataaatcgcagggttcggagtttgaccacacggcgttggtgatgccggcg
cagttcctgccggtgttgacgcgcgagctgatttataccgcgattacccgcgcgcgtaag
cagctgacgttgtacagcgatgacggcgtgttccgtcgtgccgtgcagttgcgtacccag
cgacgcagcggattactggagcggttgagcggggagtaa
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