Pantoea sp. SO10: FCN45_16565
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Entry
FCN45_16565 CDS
T06053
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pans
Pantoea sp. SO10
Pathway
pans02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCN45_16565
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
TcfC
Big_9
Cadherin_5
Big_3_3
DUF4625
DUF4369
CFSR
Motif
Other DBs
NCBI-ProteinID:
QCP60895
LinkDB
All DBs
Position
complement(3600305..3603433)
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AA seq
1042 aa
AA seq
DB search
MANNSINEIKEMKISTITEKNFGWKDKQVDLKDAGGRVEILIDGVVYKAPIDENGKWSFT
PPTGWDEGLHTVQLITIDKAGNRAPPTSFIVNLDTQAPEAPEIWRVVDNTGSNKGNLNPG
EITDEHKPVISGVAEPDAIVYLYDNGGKDPIASVKANSMGAWTITPELADGEHSLTVVAK
DAGKHESPVSAPFIVKVEAGAVVMAEGPTAEPQPSEDATANTNNFGTHGNALEKYINKNF
IEISTKVEPFAQVQITLNNEVYLVTADKDGNLHFKSDELPDGTYYYQTRVRDSANNWGPA
TSIILHVEAGAPEAPQILRVIDDEGNVDHLTSGQYTDDKTPTLSGVAKPGSLVFIYGVDS
APIGSVTAGGDGRWTFTPELTTDDTYIFNVAYQDRYGRMSPKSDNFILKLDATAPEAPSL
EGVYDDVGRVTGQLKSGDTTDDTTLSLSGKADAGSIVRIWDGEKLVATVIANSRGQWSYE
LDVAEGKHALRVDSVSKGGAASTPSEEFIVIVDTQTLPPAQIEEIVANNGAEERPLVSGD
ATNDDTPVLRGSGEEGEIVYVYDKDKVIGSAAVGKDGKWEIELDPLKEGSHELKIKVEDP
KTGKSSDFSDPVTIVVDLTAPEKPVAPGIIDNTGDEQGVIQPGTPTDETQPEFTGGGATP
GDVVEIIIIDKDGKEQVIGSGVVDEKGDWTVTPTDPIGDGDYDVVVEITDPAGNTSDRSD
PIELIIDTKVPDEITDFELWDDVGVITGQILDGGITDDKSPTVRGTGENGSKVIIYDGEK
QIGSATVVDGKWSIDLPALTEGAHNIRVQPVSASGVKGPINDGINFDVDLTAPQAGTYTG
GSFLDVEGFTRPIGSDINGQVMTLNGTGKEDGTVVVVYGDAARTEIIGSAVVTNGKWTLD
TNKLAEGSYHISFGYRDAAGNEVAGAESFDVNVDITPPEPIDPGDMFPDSFNEALMSMSL
SDILSMSEDSLFIDNGKTQLMISDSAQEVTLQDILPEGEDVNNWSQANGTVTVAGVEYNV
YQNNGGDAEVMVPQHLLQEQQH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacagcattaatgaaattaaagaaatgaaaatcagtactattaccgagaaa
aattttggttggaaagataaacaagtcgatctaaaagatgccggtggtcgtgttgagatt
cttattgatggtgtggtttacaaagcacctatcgatgaaaatggtaagtggtcatttaca
ccgccaacgggctgggacgaaggcttacataccgtgcagttgatcaccatcgataaagcg
ggtaaccgtgcaccaccaacgtccttcattgtaaatctggatacccaagctccagaagcg
ccagaaatctggcgtgtggtagacaacaccggtagtaataaaggtaatttgaatccgggc
gaaattaccgatgaacacaagcctgtcatttcaggcgtagcggagccggacgcgatcgtt
tacctgtatgacaacggtggaaaagatccgattgcttcagtcaaagctaatagcatgggg
gcatggaccattactccagaattggctgatggcgaacacagcctgaccgtagtggctaaa
gatgctggcaaacatgaaagcccagtctcagcgccattcattgtgaaagttgaagcgggc
gcagtagtgatggccgaaggcccaactgcagagccgcagccgtctgaggatgcgactgca
aataccaataattttggtactcatggtaatgctcttgaaaaatatattaataaaaacttt
atcgagatatcaactaaagtcgagcctttcgcacaggttcaaattacgctgaacaatgaa
gtgtatcttgttaccgcagataaggatggcaatttacatttcaagtctgatgaactgcca
gatgggacctactactatcagacgcgtgttcgcgatagcgctaataactggggtcccgct
acctcaatcattctgcatgtcgaagcaggcgctccggaagcaccacagatcctgcgcgtc
attgacgacgaaggtaatgttgatcacttaacttcgggtcaatacaccgatgataaaacc
ccaacgctgtcaggcgtggctaaaccgggatcgctggtcttcatttacggcgttgattca
gcaccgatcggcagcgtgaccgctggcggtgatggacgttggaccttcacaccggaactg
accacggatgatacctatatcttcaacgtagcgtatcaggatcgctacggtcgtatgagt
ccgaaatcagacaacttcatcctgaaactggatgctactgcacctgaagcgccttcactg
gaaggtgtttacgatgacgtaggccgcgtaaccggtcagctgaaatcaggcgataccact
gacgacaccactctgtcactgtcgggtaaagcggatgccggctccattgtacgtatctgg
gatggcgaaaaattagttgcaaccgttattgccaactcacgtggtcaatggtcttacgaa
ctggatgtggccgaaggcaaacatgcgctgcgcgtagattccgtctccaaaggtggtgct
gcttctactccatcagaagagttcattgtgattgttgatacccaaacgctgcctccggca
cagattgaagagatcgtcgccaacaacggtgcagaagagcgtccactggtgagcggtgat
gcaaccaacgatgacaccccagtgctgcgcggttcaggtgaagagggtgaaattgtttat
gtttacgataaagacaaagtcattggttctgctgccgtaggcaaagatggcaaatgggaa
atcgagcttgatccactgaaagaaggttctcatgagctgaagatcaaagtcgaagatcca
aaaactggcaaaagttcagacttctcagatccggtcaccatcgtggtggatttaactgca
cctgaaaaaccggtcgctccgggcattatcgacaacaccggtgatgagcagggcgtcatc
cagccaggcacgccaactgacgaaacccagccggagttcaccggtggcggtgcaacgccg
ggtgacgttgtggaaatcatcatcattgataaagacggcaaagagcaggtcattggtagc
ggcgtcgttgacgagaaaggtgattggacagtcaccccaaccgatccaatcggtgatggt
gattacgacgtggtggttgaaattaccgatccggcgggcaacacctctgatcgttccgat
ccaattgaactgattatcgataccaaagtgccggacgaaatcacggacttcgaattgtgg
gatgacgtgggcgtcatcactggtcagatccttgatggcggcatcactgatgacaaatca
ccaaccgtacgcggtaccggtgaaaacggttctaaagtcattatctatgatggcgaaaaa
cagatcggttcagcaaccgtagttgatggtaaatggagtattgatctgcctgccctgacg
gaaggtgcgcataatatccgcgttcaacctgtcagcgcttcaggtgtgaaaggccctatc
aatgacggcatcaactttgatgtggatctgaccgcaccacaggctggtacttacaccggt
ggttcattccttgatgtagaaggttttacccgcccgatcgggtcggatatcaatggtcag
gttatgacgctgaacggtaccggtaaagaagacggcaccgtagtggtggtctatggcgat
gcggcgcgtaccgaaattattggcagcgcggtggtgaccaacggcaaatggacgctggat
accaataaactggctgaaggtagctaccatatctccttcggttatcgtgatgcggcgggc
aatgaagtggccggtgcagaatcgttcgacgttaacgttgacattacgccaccagaacct
atcgatccaggcgacatgttcccagactcattcaacgaagcgctgatgagcatgtcactg
tcggatattctgtccatgagtgaagactcattgttcattgacaacggtaaaacgcagttg
atgatttcggattctgcgcaggaagtgaccttgcaagacatcctgccggaaggtgaagac
gtgaataactggagccaggcaaatggcaccgtaaccgtggcaggcgttgaatataacgtt
taccagaacaacggtggcgatgctgaagtgatggttccacagcacctgctgcaggaacaa
cagcactaa
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