Pantoea sp. SO10: FCN45_16725
Help
Entry
FCN45_16725 CDS
T06053
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_16725
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
FCN45_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
DUF6262
TetR_C_24
Mac
Motif
Other DBs
NCBI-ProteinID:
QCP61605
LinkDB
All DBs
Position
complement(3636806..3637393)
Genome browser
AA seq
195 aa
AA seq
DB search
MEKLSHKARTRQRILDEAAVVMRENGTESIGVAALMKRVGLTHGGFYAHFASREDLVQAV
IAEMFADSARRFADITSINDPAERLSQLIDSYLSEHHCNTPGEGCPLPALVSEMAHLPVE
ARTLFSQRREAMRQRLALTLHELNHPHADDAATTMLAEMVGAVAMARACPDDEEARTMLA
SSRRSVKQRAGLEMA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgagccataaagcgcgtacgcgacagcgcattctggatgaagccgctgtg
gtaatgcgcgagaacggcactgaaagcatcggcgtcgcggcgctgatgaagcgcgtgggc
ttaacgcacggcggcttttatgcccacttcgcctcgcgcgaagatttagtgcaagcggtg
atcgctgagatgtttgccgattcggcgcgccgctttgcggatatcacctcaattaacgat
cccgctgaacgactgagtcagttaatcgatagctatttatccgagcatcattgcaacacg
ccgggtgaaggctgtccgctgcctgcgctggtgagtgaaatggcacatttaccggttgag
gcgcgcacactattttcccagcggcgagaagccatgcggcagcgcctggcgttgacgcta
catgaacttaaccatccgcatgcggatgacgccgcgaccaccatgttggctgaaatggtt
ggcgcggtggcaatggcacgtgcttgtccggacgacgaggaagcacgtacgatgctggcg
agcagtcgtcggtcggtaaaacaacgcgccggactggagatggcatga
DBGET
integrated database retrieval system
