Pantoea sp. SO10: FCN45_17160
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Entry
FCN45_17160 CDS
T06053
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pans
Pantoea sp. SO10
Pathway
pans02020
Two-component system
pans02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCN45_17160
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FCN45_17160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pans02035
]
FCN45_17160
Bacterial motility proteins [BR:
pans02035
]
Flagellar system
Chemotaxis proteins
MCPs
FCN45_17160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cache_3-Cache_2
MCPsignal
sCache_3_3
HAMP
sCache_3_2
DUF1664
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
QCP61007
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Position
3726867..3728798
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AA seq
643 aa
AA seq
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MKRLSLSAMGLGIKLSVLTSLSVAIVLFTLTLTLSHNAARQLEQLATDDMQNQVQGINEM
ATMFNATLSEEVANYTKLFQSFLPKRFSRDDSERVQVGEFSTPTLRAGLKTLNLDQIAVD
DFLDRTGAVSTIFVRDGEDYIRIATSLKKEDGSRAVGTKLDRSSAAWRSVNQGTVYRGLA
TLFGHRYITQYQPVQDSSGAVIAILFVGVQIDAQYALMRDKVLARHLGDSGTFSVLNGTP
GSSQGQYLFDRHAEGKLPRWDNATQQQLLSQPKGLVAIELDGETKLLAWQQLPGWNWIIA
GEVSRASLLAPITHSRNLFMAIGLALVIAFAIGFMWYSRRAITRPLQQVIHLAEQYAAGN
LQAHLDSSRRDEIGQLVSAINGIGDGLEKVVSQVRSAAREISSGTDTIAASSSSISEQIG
RQASSVEETSASMEQFGATVAQTAANVRQAMALVGEAANTVNHGGSTVARSVETMSEIRV
ASQSIADITHVIESIAFQTNILALNAAVEAARAGEHGKGFAVVAAEVRALAQRSATAAKE
IDGLIASSIDKVAAGHTLSEQTRDAMSHIVNHIEQVKTLMGEINIAAQEQAAGIGQVKLA
MNHISQATHQSSDMINQSETTANHLSKKGHHLTQLVSIFHLKD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtctttctctcagcgccatgggtctcggaatcaagctgtctgtattgacgtct
ttgagcgtggcaattgtgctatttacgctgaccttgaccctgagccataacgcggcacgt
cagctggagcaactggccaccgatgatatgcagaatcaggtgcaaggcattaatgaaatg
gccaccatgttcaacgccacgctgtcggaagaggtggcgaattacaccaaactgttccaa
agcttcctgccaaaacgttttagtcgtgacgacagcgaacgtgtgcaggtaggtgaattc
agcacgccaacgctgcgagcgggattgaaaaccctcaacctcgatcagatcgcggtagat
gattttctcgatcgtactggtgcggtatccaccatcttcgtgcgtgacggcgaagattac
atccgcatcgccacctcgctgaaaaaagaggatggcagccgcgcggtgggcaccaaactg
gatcgcagcagcgccgcctggcgcagcgtcaatcagggcacggtctatcgcggcctggcg
acgctgtttggccatcgttacattacgcaatatcagccggtgcaggatagcagcggcgcg
gtgatcgctattctgttcgtcggggtacagatcgacgcgcagtacgcgctgatgcgtgac
aaagtgctggcgcgccatcttggtgacagcggcaccttctcggtgttgaatgggacgccg
ggcagcagccagggccaatatctgtttgatcgtcacgctgaaggcaaactgccgcgctgg
gataacgccacgcagcagcaattgcttagccagccgaagggattagtggcgattgaactg
gatggcgaaaccaaactgctggcgtggcagcagctgccgggctggaactggatcatcgcc
ggtgaagtgagccgtgccagcctgctggcgccaatcacgcacagccgtaacctgtttatg
gcgattggcctggcgctggtgatcgcgtttgccattggctttatgtggtacagccgccgc
gccatcacgcgtccgctgcagcaggtgatccatctggcagaacagtacgccgctggtaat
ctgcaggcacatctcgactcttcacgtcgtgatgagattggtcagttggtcagcgcgatc
aacggcattggcgatggactggagaaagtcgttagtcaggtacgttcggcggcgcgggaa
atcagcagcggcaccgataccatcgccgccagcagctccagcatcagcgagcagattggc
cgtcaggccagcagcgtggaggaaacctcggccagcatggagcagtttggcgccaccgtg
gcacaaaccgctgccaacgtgcggcaggcgatggcgctggtcggtgaagcggctaatacc
gtgaatcacggcggcagcaccgtggcacgttcggtggaaaccatgtcggagattcgcgtg
gcgtcgcagagcatcgccgatatcacccatgtgattgagtcgatcgccttccagaccaac
attctggcgctcaatgccgcggttgaagccgctcgcgccggtgaacacggtaaaggcttt
gcggtggtcgcggcggaagtgcgcgcgctggcacagcgcagtgctacggcagccaaagag
attgatggattgattgccagctccatcgataaagtggcggccggccatacgttatctgag
cagacgcgcgatgcgatgagccatatcgtcaatcacatcgagcaggttaaaacgctaatg
ggtgagatcaatattgccgcgcaggaacaggcggcgggcattggtcaggtgaaactggcg
atgaatcacatcagccaggccacgcatcaaagcagcgatatgattaaccagtcagaaacc
accgccaatcatctgagtaagaaagggcatcatctaacgcagctggtgagcatttttcat
ctgaaggactaa
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