Pantoea sp. SO10: FCN45_18670
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Entry
FCN45_18670 CDS
T06053
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_18670 (hdfR)
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FCN45_18670 (hdfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Ciart
Motif
Other DBs
NCBI-ProteinID:
QCP61289
LinkDB
All DBs
Position
4027000..4027821
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AA seq
273 aa
AA seq
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MDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTSA
GERLLPYAESLMSTWLMAKKEVSHTQQHHELSIGGSASLWEAYLTPWLQTLYENRESLHL
EARIAQRHLLVKQLHERQLDLLITTEAPKMDELTSQQIGHISLALFRARKTEKREKYDYI
KLEWGADFHQHESYLSSDDVPVLTTTSAHLTRELLHTTGACAFLPDFWHGIYSDLMVIPD
TPVAVRPLYAVWLQNSDQQSHIRQLLKYPVLTQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtggatacggaattactgaaaactttcctcgaagtgagcagaacacgccatttcgggcgt
gctgctgaagcgctttacctcacgcaatctgccgttagttttcgcattcgtcagctggaa
aatcagctgggcgtaaacctttttactcgtcaccgtaataacatccggctgacttcagca
ggcgagcgtttattaccctatgccgaaagcctgatgagcacctggctgatggccaaaaaa
gaagtctcgcatacacaacagcatcatgagctttcaataggaggtagcgcatccctttgg
gaagcgtacttaactccctggttgcaaacactttatgagaatcgcgaaagccttcatctc
gaggcacgtatcgcccagcgacatttactggttaagcaattgcatgaacgtcagttggac
ctgttgatcacaactgaagcgccaaaaatggatgagttaaccagccagcaaatagggcat
atttcgctcgcattattccgggcgcgtaaaaccgagaagcgtgaaaaatatgactatatc
aagctggaatggggcgcagattttcatcagcatgaaagttatctgtccagtgatgatgtt
cccgtattaaccaccacatccgcacatttaacacgcgaattactgcataccaccggtgct
tgtgcctttttacctgatttttggcacggcatttatagtgatttgatggttattccagat
acacccgtcgccgtgcgaccgttatatgcggtgtggctgcagaatagcgatcagcaaagt
cacattcgtcagctgcttaaatatccggttttgacacaataa
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