Pantoea sp. SO10: FCN45_19230
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Entry
FCN45_19230 CDS
T06053
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCN45_19230 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pans03021
]
FCN45_19230 (rpoZ)
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_19230 (rpoZ)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCN45_19230 (rpoZ)
Transcription machinery [BR:
pans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FCN45_19230 (rpoZ)
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FCN45_19230 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
QCP61390
LinkDB
All DBs
Position
4143793..4144068
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLVAARRARQMQVGGKDALVPEENDKPTVIALREIEEGLIT
TQILDVRDRQEQHEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagagaaagttggtaaccgttttgacctggtg
ttggtcgctgcacgtcgtgcacgtcagatgcaggtaggcggtaaagatgcgctggttccg
gaagagaacgataagccaaccgttatcgccctgcgcgaaatcgaagaaggtttgatcact
acccagattctggatgtccgtgatcgtcaggaacagcatgagcaggaagccgctgagtta
caagccgttaccgctatcgctgaaggtcgtcgttaa
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