Pantoea sp. SO10: FCN45_19415
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Entry
FCN45_19415 CDS
T06053
Name
(GenBank) response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pans
Pantoea sp. SO10
Pathway
pans02020
Two-component system
pans02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCN45_19415
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCN45_19415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pans02022
]
FCN45_19415
Two-component system [BR:
pans02022
]
OmpR family
QseC-QseB (quorum sensing)
FCN45_19415
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GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
QCP61421
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Position
4186886..4187548
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AA seq
220 aa
AA seq
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MRILLIEDDTLIGDGLKVGLTKLGFSVDWFVSGEAGFQALTAAPWDAVVLDLSLPERDGL
DILRQWRQQGHDVPVLILTARDALDQRVQGLQLGADDYLCKPFALTEVAARLQALIRRRH
GQLQPELKHGNVVMAPGSHSVLCDGEPVSLKSRELALLELFLRNPGRVLTRSQLEEKLYS
WDEDVSSNAVEVHIHHLRKKLGSQFIRTVHGVGYTLGAAE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttactgattgaagatgacacgctgattggcgacggtttgaaagtcgggttg
accaaactcggtttcagcgtggattggtttgtctccggcgaagccggatttcaggcgttg
accgccgcgccctgggacgcagtggtgctggatctgtcgctgcccgaacgcgatggtctg
gatatcctgcgtcagtggcgccagcaaggacacgatgtgccggtgctgatcctcaccgcg
cgcgatgcgctcgatcagcgcgtccagggattgcaactcggcgccgacgattatctgtgt
aagccgtttgcgttaacagaagtggcggcacgcttgcaggcgttgatccgtcgccgtcat
gggcaactgcagccggaactgaaacacggcaacgtggtaatggcgcccggcagccacagc
gtgctgtgcgatggcgaacccgttagcctgaaaagccgcgaactggcgctgctggaactg
tttctgcgtaatcctggccgcgtgctgacgcgcagtcagctggaggagaagctctacagc
tgggatgaagatgtctccagcaatgcggtggaagtgcacattcatcatctgcgcaagaaa
ctcggcagccagtttattcgtaccgtacacggcgtcggttatacgctgggagcggcggaa
tga
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