Pantoea sp. PSNIH1: PSNIH1_00160
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Entry
PSNIH1_00160 CDS
T03464
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pant03016
]
PSNIH1_00160 (truA)
Enzymes [BR:
pant01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSNIH1_00160 (truA)
Transfer RNA biogenesis [BR:
pant03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSNIH1_00160 (truA)
Prokaryotic type
PSNIH1_00160 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIX48785
LinkDB
All DBs
Position
complement(33144..33950)
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AA seq
268 aa
AA seq
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MQAEATTLKLALGIEYDGSRYYGWQRQNEVRSVQEKLEKALAKVANHDVSVFCAGRTDAG
VHGTGQVVHFETTSRRADSAWTLGVNANLPDDIAVRWVKAVPESFHARFSATARRYRYVI
YNQRLRPAILGNGLTHYYHPLDAEKMQRAGQHLLGENDFTSFRAVQCQSRTPWRNVIHLN
VIRQGAFVIVDIKANAFVHHMVRNIVGSLIEVGNGNQPESWIADLLAAKDRTLAAATAKA
EGLYLVAVDYPSHFALPQPAPGPLFLAD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggaggcgacaaccctgaagctggcgctgggcattgagtatgacggcagccgc
tactatggctggcagcggcaaaatgaagtacgcagcgtgcaggagaagctggagaaagcg
ctggcgaaagtagcgaaccatgacgtcagcgtgttttgcgccgggcggacagacgcaggc
gtacacggcaccggtcaggtagtgcattttgaaaccacttcccggcgcgctgacagcgcc
tggacgctgggggtcaatgccaatctgccggatgatatcgccgtacgctgggtaaaagcg
gtgccggagagctttcacgcgcgcttcagcgcgaccgcgcgacgctaccgctatgtgatt
tataatcagcggctgcgcccggctattctcggcaacgggctgacgcactactaccatccg
ctggacgcagagaaaatgcagcgtgccggtcagcatctgctgggtgaaaatgacttcacc
tcgtttcgtgccgttcagtgccagtcgcgtacgccatggcgtaacgtgatccatctgaac
gtcatacggcagggggcatttgtcattgtcgatatcaaagcgaacgccttcgtgcaccat
atggtgcgtaacatcgtcggcagcctgatagaggttggcaatggcaatcagccggagagc
tggatagcggatctgctggcggcaaaagatcgcacgctggcagcggcaaccgcgaaagcg
gaagggttatacctggtggcggtggattacccgtcccattttgcgttaccacagcctgcg
ccgggaccactgttcctcgcagattaa
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