Pantoea sp. PSNIH1: PSNIH1_01310
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Entry
PSNIH1_01310 CDS
T03464
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSNIH1_01310 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_01310 (xseA)
Enzymes [BR:
pant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSNIH1_01310 (xseA)
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSNIH1_01310 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Glyco_tran_WecG
DmmA-like_N
Motif
Other DBs
NCBI-ProteinID:
AIX48988
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All DBs
Position
237725..239098
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AA seq
457 aa
AA seq
DB search
MSLPATANIFTVSRLNTTVRTLLENEMGLVWLSAEISNFTQPASGHWYFTLKDDGAQVRC
AMFRNSNRRVTFRPQHGQQVLVRASVTLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKAQ
LSAEGLFDQQFKQPLPDPARQVGVITSATGAALHDVLRVLHRRDPSLPVVIYPTVVQGAD
APAAIVRAIGLANQRNECDVLIVGRGGGSLEDLWCFNDERVARAIFASRLPVVSAVGHET
DVTIADFVADLRAPTPSAAAEIVSRNQVELLRQLQSQQQRMEMAMDYYLAGQQRYLTQLQ
HRLQQQHPQLRLARQQTALFQLQRRLGAAADRQLRSAQRQQDRLLQRLSAQQPQGRILRA
QQQLAHWHYRLQQSMQQQLGQDRQRFGTLMAQLEGVSPLATLARGFSVTTDAQGEVVKQI
APLQPGDRLRTRLEDGWVESEVTALTPLKRRRKPRQS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgcaaccgccaatatttttaccgtcagccgcctcaacaccacggtgcgc
acgctgctggaaaatgagatgggcctggtgtggctcagcgctgagatctccaatttcacg
cagcccgcgtccggccactggtacttcacgctgaaagatgatggtgcccaggtgcgctgt
gcgatgttccgcaacagcaaccggcgcgtgacgttccggccgcagcacgggcagcaggtg
ctggtgcgggccagcgtcacgctgtatgagccgcgcggcgactatcagttaatcattgaa
agcatgcatccggcgggtgaaggcctgctgcagcagcagtttgagcagctgaaagcgcag
ctcagcgcagaagggttgttcgatcagcagttcaaacagccgctgcccgatccggcccgt
caggtcggggtgatcacctccgcaaccggcgccgcgctgcatgatgtgctgcgcgtgctg
caccgccgcgatccctcactcccggtggttatctaccctaccgtggtgcagggagccgat
gcgcccgctgccatcgtgcgcgctatcgggctggccaaccagcgcaatgaatgtgacgtg
ctgattgtcggccgcggcggcggttcgctggaagatctctggtgcttcaacgatgagcgc
gtggcgcgggcgatttttgccagccgcctgccggtggtcagcgccgtagggcatgaaacg
gatgtcaccatcgccgattttgtcgccgacctgcgcgcgcccacgccctctgccgccgct
gagattgtcagccgcaatcaggtcgagctgctgcggcagctgcagtcgcagcagcagcgc
atggagatggcgatggactactatctcgccgggcagcagcgttacctcacgcagcttcag
catcgcctgcagcagcagcatccgcagctgcgcctggcacggcagcagaccgccctgttt
cagctgcagcgtcgcttaggcgcggccgccgatcggcagctgcgcagcgcgcagcgccag
caggatcggctgctgcagcggctcagtgcgcagcagccacaggggcgcatcctgcgcgcg
cagcagcagcttgcgcactggcactaccgtctgcagcagagcatgcagcagcagctgggg
caggatcgccagcgctttggtacgctgatggcgcagctggaaggggtcagtccgctggcg
acgctggcgcgcggcttcagcgttaccaccgatgcgcagggcgaagttgtaaaacagatc
gcgccgctgcagccaggcgacaggctgcgcacccggctggaagatggctgggtggagagc
gaagtcaccgccctcacgccgctgaaacgccgccgtaaaccccgccaatcctga
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