Pantoea sp. PSNIH1: PSNIH1_01330
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Entry
PSNIH1_01330 CDS
T03464
Name
(GenBank) GTP-binding protein Der
KO
K03977
GTPase
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pant03009
]
PSNIH1_01330
Ribosome biogenesis [BR:
pant03009
]
Prokaryotic type
GTPases
PSNIH1_01330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Ras
Roc
AAA_22
AAA_24
TniB
SRP54
SRPRB
Nuc_deoxyri_tr2
RHD3_GTPase
NOG1
Motif
Other DBs
NCBI-ProteinID:
AIX48992
LinkDB
All DBs
Position
complement(243313..244797)
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AA seq
494 aa
AA seq
DB search
MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI
DGTEEGVENRMAEQSLLAIEEADVVLFMVDARAGVMPADQQIANHLRSREKATFLVANKT
DGLDADAAVLDFYALGLGDIHPIAASHGRGVTSLLETALLPWMDVADPQEVSEEDENEAY
WAALAAEESGEEAEEEEEFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTT
RDSIYIPMERDEREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVIDARAG
ISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKDEVKETLDYRLGFIDFARVHFISALH
GSGVGNLFESVTEAYDCSTKRVNTSMLTRIMNMAAEDHQPPLVRGRRVKLKYAHAGGYNP
PIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPYAGKRNLLTPTQQR
KRKRLLAHLKKNKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtacctgtggtcgcgctggttgggcgtcccaatgtggggaaatccacgctgtttaac
cgcttaacgcgcacccgtgatgcgttagtggccgatttccctggactgactcgcgatcgc
aaatatggtcgcgccgaagtggaagggcgcgaatttattgttatcgataccggcggtatt
gatggcaccgaagagggcgtagagaaccgcatggcggagcagtcgctgctggcgattgaa
gaagcggatgtggtgctgttcatggttgatgcccgcgcaggcgttatgccggcggatcag
cagatcgctaaccatctgcgctcccgtgaaaaagcgacgttcctcgtagcgaacaaaacg
gatggcctggacgccgatgccgccgtgctggacttttacgcgctaggtctgggtgatatt
catccgattgccgcctcgcacggtcgcggcgttacctcgctgctggaaaccgcgctgctg
ccgtggatggacgtggcagacccgcaggaagtcagcgaagaggatgaaaacgaagcctac
tgggccgcattagccgcagaagagagtggcgaagaggcggaagaggaagaggagtttgat
ccgaccggcctgccgattaagctggctatcgtgggtcgtcctaacgtaggtaagtcaacg
ctcactaaccgtattcttggtgaagatcgcgtggtagtctatgacatgccaggcacgacg
cgtgacagcatctatatcccgatggagcgtgacgagcgcgaatatgtcctgatcgacacc
gccggggtgcgcaagcgtggcaagatcaccgataccgttgagaaattttcggtgatcaaa
accctgcaggcgatcgaagatgctaacgtcgtgatgctggtgattgacgcgcgtgccggt
atctccgaccaggatctctccctgctgggctttatcctcaacagcggacgttcgctggtg
attgtggtcaacaaatgggatggcctgtcgcaggaagtaaaagatgaagtgaaagagacg
ctggattatcgtctcggctttatcgattttgcccgcgtacactttatttcggcgctgcac
ggcagcggcgtaggtaacctgtttgaatccgtaacggaagcgtacgactgctcaaccaaa
cgcgtaaacacctccatgctgacgcggattatgaatatggcagcagaagatcatcagccg
ccgctggtgcggggccgtcgcgttaagctgaaatatgcgcacgccggtggatacaacccg
cctatcgtggtcatccatggtaatcaggtaaaagatctgcccgattcctacaagcgttat
ctgatgaactacttccgtcgctcgctgaacgttatgggtacgccaatccgtatccagttc
aaagagggtgataacccgtatgccggcaaacgcaatctgctgacgccgacgcagcagcgc
aagcgcaagcgtctgctggcgcacctgaaaaagaataagcgttaa
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