KEGG   Pantoea sp. PSNIH1: PSNIH1_01515
Entry
PSNIH1_01515      CDS       T03464                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pant  Pantoea sp. PSNIH1
Pathway
pant03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pant00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PSNIH1_01515 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pant03019]
    PSNIH1_01515 (rnc)
   03009 Ribosome biogenesis [BR:pant03009]
    PSNIH1_01515 (rnc)
   03036 Chromosome and associated proteins [BR:pant03036]
    PSNIH1_01515 (rnc)
Enzymes [BR:pant01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PSNIH1_01515 (rnc)
Messenger RNA biogenesis [BR:pant03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PSNIH1_01515 (rnc)
Ribosome biogenesis [BR:pant03009]
 Eukaryotic type
  90S particles
   RNase
    PSNIH1_01515 (rnc)
 Prokaryotic type
  rRNA processing factors
   PSNIH1_01515 (rnc)
Chromosome and associated proteins [BR:pant03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PSNIH1_01515 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: AIX49026
LinkDB
Position
complement(283887..284567)
AA seq 226 aa
MNPILITKLQRKLGYTFTHPELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSNIQTVEKLILDWYLNRLEQISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGVGSSRRKAEQAAAEQALIKLGLE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccattctcattactaagctgcagcgcaaactgggctacacttttactcatccg
gaacttttgcagcaggccctgacacaccgcagcgccagcagcaagcataacgaacggctt
gaatttttaggcgattcaattctcagctatgtgattgccaacgcgctttatcaccgcttc
ccgcgcgtggacgaaggcgatatgagccgcatgcgcgccacgctggtgcgcggcaatacg
ctggctgagatggcgcgtgagtttgaactgggcgagtgcctgcgtcttggaccaggcgaa
ctgaaaagcggcggcttccgtcgcgagtcgatccttgcggatacggtagaggcgctgatt
ggcggcatcttcctcgacagtaatatccagaccgttgagaagctgattctcgactggtat
ctgaaccgtctggagcagataagcccgggcgataaacagaaagatcccaaaacgcgcctg
caggagtatctgcagggtcgccatctgccgctgccttcctatctggtggtgcaggtgcgg
ggcgaagcgcacgaccaggagttcaccattcactgtcaggtgagtggcatggccgatccg
gtcgtgggcgtaggctccagccgccgcaaagcggaacaggctgccgccgaacaggcttta
attaagcttggactcgaataa

DBGET integrated database retrieval system