Pantoea sp. PSNIH1: PSNIH1_02545
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Entry
PSNIH1_02545 CDS
T03464
Name
(GenBank) ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSNIH1_02545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pant02000
]
PSNIH1_02545
02044 Secretion system [BR:
pant02044
]
PSNIH1_02545
Transporters [BR:
pant02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSNIH1_02545
Secretion system [BR:
pant02044
]
Type I secretion system
Adhesin protein transporter
PSNIH1_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
ABC_ATPase
AAA_23
NACHT
FtsK_SpoIIIE
MMR_HSR1
RsgA_GTPase
AAA_15
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AIX49200
LinkDB
All DBs
Position
complement(508415..510592)
Genome browser
AA seq
725 aa
AA seq
DB search
MTQLPIPDAPEGQSASGGELPLNGWATAIIQIATHYRLPCSPGMIMAAAEWQGKQTRDKA
LRHLARQAGLSLQLFAEESREITRWRLPLAVELDDGQVGVVTAFDGDDRVRVHFSGDEQP
TPVMLTDLLPALRVVAALRPVAAAKDSRVDRYLATVRPDWLRRLVLHDLRPYGYVMLASF
LINLLALVGIVFSMQVYDRVIPAQSYPTLYVLYAGVIISVVFTYILRVGRDHVTDLLGKR
ADMRVSDRVFGHALRLRNSVVPRSTGTFISQLRELEAIREMVTSTTVTAIVDMPFFLLFL
LVMAIIAPQLAWIAPVAVLLMVLPGLLSQKKLAKLAQQALKESTLRNAVLVESVQGLEDI
KLMQAEDRFLQQWNSYIRITAQSGVAMRKVMHSLISWGVTVQGLVYASVIVVGAPMVING
DITTGAIVAASLLSSRMIAPMATLCGVLARWQQVRAAKTSLDGLMNLPVENSSDETRIHC
PVLFGHYQFTDAMFRYYSDSLTMALRIKSLTIQPGERIAVLGRNGSGKSTLLQAMAGGMD
LVSGELRLDNLSLPHIDVADVRRNVGLLTQNARLFHGTLRENLTLGAAHATDDAIFSALT
VSGGAEFIRRLPLGLDHPIMEGGTGLSGGQRQSLLLARMLLRDPNIVLLDEPTAALDDHT
EKEFIERLGAWLNGRTLIVATHRAAILSLVDRILVLKEGQLVMDSPKEKALPPARSGGNL
PEVNA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacccaattaccgattccggacgcacctgagggccagtccgccagcggcggcgagctg
ccgcttaacggctgggccacggccattattcagatcgccacccactaccggctgccctgt
tcgccgggcatgatcatggcggcagcggagtggcagggcaaacagacgcgcgataaagcg
ctgcgccatctggcacgtcaggcggggctgtcgctgcagctgtttgcagaggagagccgg
gagatcacgcgctggcgcctgccgctggcggtagagctggatgatggccaggtcggcgtg
gtgacggcgtttgatggtgatgaccgcgttcgggtgcacttttccggcgatgaacagccg
acgccggtgatgctcaccgatctgctgcccgccctccgcgtggtggccgcgctgcgaccg
gtggcggcggcgaaagatagccgggtcgatcgctatctcgccaccgttcgccccgactgg
ctgcggcggctggtgctgcacgatctgcgtccctacggctatgtgatgctggcgtccttc
ttgatcaatctgctggcgctggtagggattgtgttttcgatgcaggtctatgaccgggtg
atcccggcgcaatcttatcccacgctctatgtcctctatgctggcgtgatcatttcggtg
gtatttacctatattctgcgcgtgggccgcgatcacgtcaccgatctgctgggcaagcgc
gccgatatgcgcgtctccgatcgggtgtttggtcatgcgctgcggctgcgcaacagcgtg
gtgccgcgctctaccggcacttttatctcccagctgcgtgaactggaggcgatccgggaa
atggtgacctcaaccaccgtgacggcgattgtcgatatgccatttttcctgctgtttctg
ctggttatggcgattatcgcgccacagctggcgtggatcgccccggtggcggtgctgctg
atggtgttgccgggcctgctcagccagaaaaaactggcgaagctggcgcagcaggcgctg
aaagagtccacgctgcgtaacgcagtgctggtggagagcgtacaggggctggaggatatc
aagctgatgcaggcggaagatcgctttctgcagcagtggaacagctatatccgtatcacc
gcgcagtcgggcgtggcgatgcgtaaggtgatgcactcgctcattagctggggcgtaacg
gtgcaggggctggtttacgccagcgtcattgtggtgggcgcgccgatggtgatcaacggc
gatatcaccaccggggcgattgtcgcggcgtcgctgctctcctcgcgcatgattgcgccg
atggcaacgctgtgcggcgtactggcgcgctggcagcaggtcagggcggcgaaaaccagt
ctcgacggcctgatgaatctgccggtagagaacagcagcgatgagacgcgtattcactgt
ccggtgctgtttggccactatcagttcaccgacgctatgtttcgctactacagcgactcg
ctgaccatggcgctgcgcattaaatccctgaccattcagcctggggagcgtattgcggtg
ctgggccgcaacggctccggtaaatccacgctgctgcaggcgatggcgggcggcatggat
ctggtgagcggtgagctgcggcttgataacctcagcctgccgcacattgacgtggccgac
gtgcggcgcaacgtcgggctgctgacgcaaaacgcgcgcctgtttcacggtacgctgcgt
gaaaacctgacgctcggcgcggcgcacgctaccgacgacgccatcttctctgcgctgacg
gtgagcggcggagcggaatttattcgccgcctgccgctggggctggatcacccgatcatg
gaggggggcaccggcctctccggcgggcagcggcagtcgctgctgctggcgcgcatgctg
ctgcgcgatcctaatatcgtgctgctggatgaacccaccgccgcgctcgacgaccatacg
gagaaagagtttattgagcgcctcggcgcatggctgaacggccgcacgctgatcgtggcg
acgcatcgcgccgcgattctgtcgctggtggatcggatactggtgctgaaagaggggcag
ctggttatggacagtccgaaagagaaagcgctgccgccagcgcgcagcggcggaaatctg
ccggaggtgaacgcatga
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