Pantoea sp. PSNIH1: PSNIH1_03070
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Entry
PSNIH1_03070 CDS
T03464
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSNIH1_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_03070
Enzymes [BR:
pant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
PSNIH1_03070
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSNIH1_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIX49294
LinkDB
All DBs
Position
complement(638848..639375)
Genome browser
AA seq
175 aa
AA seq
DB search
MQPDHDIRDILSHDLQVLFCGINPGKSSAHTGYHFAHPGNRFWKVIYLAGFTRELLKPEQ
ERRLLETGCGITALVERPTTQASELSGDELRDGGLRLQDKILRYQPRALAVLGKDAYQRA
FRQRKVEWGEQPQPLMETRIWVLPNPSGLNRASLEEMVAAYRQLADALGLPERGQ
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccgaccacgacattcgcgatattctctcgcacgatctgcaggtgctgttctgc
ggcatcaatcccggcaagtcatctgcgcataccggttaccattttgcgcatcccggcaac
cgcttctggaaagtgatctatctggctggctttacgcgcgagctgctgaagccggagcag
gagcggcggctgctggagaccggctgcggcatcaccgcgctggttgagcgtcccaccacg
caggcgagcgagctgagcggcgatgagctgcgcgacggcgggctgcggctgcaggataaa
attttacggtatcagccgcgggcgctggcggtgctgggcaaggatgcgtatcagcgtgcg
ttccggcagcgtaaagtggagtggggcgagcagccgcagccgctaatggagacgcgcatc
tgggtgctgccaaatcccagtggccttaaccgcgcttcactggaggagatggtggcagcg
tatcgccagctggcggatgcgctgggtctgccggagcgcgggcaataa
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