Pantoea sp. PSNIH1: PSNIH1_05170
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Entry
PSNIH1_05170 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_05170
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSNIH1_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AIX49671
LinkDB
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Position
complement(1045501..1046418)
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AA seq
305 aa
AA seq
DB search
MNIRDLEYLVSLAEHRHFRRAADACHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
GLLLVDQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTTGPYLLPNIIPMLHQTFPKL
EMYLHEAQTQQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMKLAIYKDHPWHDRDR
VPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL
PSLAVPKERVRDGVCYLPCYKPVPQRTIALVYRPGSPLRSRYEQLAEAIKTHMQGHFDAA
LKQAV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcgcgatctcgagtatctggtttcacttgcggaacaccgccatttccgtcgc
gctgctgatgcctgtcatgtcagtcagccgactctgagcggacagatccgcaagctggaa
gatgaactgggcgtcatgctgctggaacgtaccagccgtaaagtgctgttcacccaggca
ggattactgctggttgatcaggcgcgaaccgtactgcgtgaggttaaggtgctgaaagag
atggccagccagcagggtgaagcgatgtccggaccgctgcatatcggactgatccccacg
accggcccctatctgctgcccaatattattcctatgctgcatcagactttcccgaagctg
gagatgtatctgcatgaagcacagactcagcagttgctggcacagctcgacagcgggaaa
cttgactgcgctattctggcgctggttaaagagagtgaagcctttattgaagtgccgctg
tttgatgagcccatgaagctggcgatctacaaagatcacccgtggcacgatcgcgatcgc
gtgccgatgtccgatctggcgggtgaaaaactgctgatgctggaagatggtcactgcctg
cgcgaccaggcgatgggcttctgctttgaggcgggtgcggacgaagatacccattttcgc
gccaccagcctggaaacgctgcgtaatatggtggcggccggcagcggcattacgctactg
ccttcactggcggtgcctaaagagcgcgtgcgcgatggtgtctgctatctgccctgttat
aaaccggtaccgcagcgcactatcgcgctggtttaccggccaggttcgcctctgcgcagc
cgctatgagcagctggcagaagcaatcaaaacccatatgcagggccattttgacgccgcg
ttaaaacaggcggtttaa
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