Pantoea sp. PSNIH1: PSNIH1_05230
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Entry
PSNIH1_05230 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_05230
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSNIH1_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
TetR_N
HTH_Crp_2
HTH_IclR
MarR_2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AIX49683
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Position
1062574..1063605
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AA seq
343 aa
AA seq
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MDPKQTSSAATMKDVAEHAGVSTATVSRALMNPEKVSAATRQKVEQAVIATGYASHGLSR
NARRNETRTILVIVPDICDPFFSEIIRGIEVTAAQQGYLVLIGDCAHQDHQEKTFLDLML
TRQIDGMVLLGSQLPFDADPEALRSLPPMVMGNEFAPEMALPTVHIDNLTAAFEAVNHLL
QLGHRRIACITGPEAVPLSQYRLQGYIQALRRSSIPVEPMFIVRGDFSFEAGARALKQLM
SLPQPPEALFCHSDLMALGAMNQARKLGMRIPQDLSIVGFDDIELARYYEPPLTTVAQPR
FDIGREAMLLLLDELQGKRVNNGSRLLDAELRVRGSTAPAKKR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggacccgaagcaaacttcatctgctgccacgatgaaagatgtggctgagcacgcaggc
gtctctacggcgaccgtttcccgggcgctgatgaatccggagaaagtgtcagccgcaacc
cggcaaaaagtcgagcaggcggtcattgcgacaggctatgcatcgcatggcctgtcgcgc
aatgccagacgcaatgaaacccggactatcctggtgattgtgcccgatatctgcgatccc
ttttttagcgaaattatccgcggcattgaggtcaccgccgcgcagcaggggtacctggtg
ctgattggcgactgcgcgcatcaggatcatcaggaaaaaacctttcttgatctgatgctg
acgcgacagattgacggcatggtgctgctgggttcacagctgccgtttgacgccgatcct
gaagcgctgcgcagcctgccgcccatggttatgggaaatgaattcgcgccggagatggcg
ctgcccaccgtgcacattgacaacctgaccgcggcgtttgaagccgttaaccatttgctg
cagctcgggcatcgtcgtatcgcctgtattaccgggcctgaagcggttccgctcagccag
tatcggctgcagggttatattcaggcgctgcgccgcagcagcatccccgttgaaccgatg
tttatcgtacgcggtgatttctcgtttgaagccggtgcccgcgccctgaaacagctgatg
agtctgccgcagcccccggaagcgctattctgtcacagcgatctgatggcgctgggcgcc
atgaatcaggcgcgcaaactggggatgcgcattccgcaggatctctccatcgttggcttt
gatgatattgagctggcgcgctattacgaaccgcccctgactaccgtggcgcagccgcgc
tttgatattggccgcgaagcgatgctgctgctgctggatgagctgcagggcaagcgggta
aataatggttcgcgcctgctggatgcagaactgcgcgtgcgcggcagtacagcaccggct
aaaaagcgttag
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