Pantoea sp. PSNIH1: PSNIH1_06550
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Entry
PSNIH1_06550 CDS
T03464
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant00071
Fatty acid degradation
pant00280
Valine, leucine and isoleucine degradation
pant00310
Lysine degradation
pant00362
Benzoate degradation
pant00380
Tryptophan metabolism
pant00410
beta-Alanine metabolism
pant00640
Propanoate metabolism
pant00650
Butanoate metabolism
pant00907
Pinene, camphor and geraniol degradation
pant00930
Caprolactam degradation
pant01100
Metabolic pathways
pant01110
Biosynthesis of secondary metabolites
pant01120
Microbial metabolism in diverse environments
pant01200
Carbon metabolism
pant01212
Fatty acid metabolism
Module
pant_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSNIH1_06550 (fadB)
00650 Butanoate metabolism
PSNIH1_06550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSNIH1_06550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSNIH1_06550 (fadB)
00310 Lysine degradation
PSNIH1_06550 (fadB)
00380 Tryptophan metabolism
PSNIH1_06550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSNIH1_06550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSNIH1_06550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSNIH1_06550 (fadB)
00930 Caprolactam degradation
PSNIH1_06550 (fadB)
Enzymes [BR:
pant01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSNIH1_06550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSNIH1_06550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSNIH1_06550 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSNIH1_06550 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIX49920
LinkDB
All DBs
Position
complement(1349402..1351585)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGDTFSLHWLEDGVAELVFDAPGSVNKLDIKTVASLGEALNVLQQQPGLRGLLLSSA
KPAFIVGADITEFLSLFDAPEEKLSAWLTFANSIFNRLEDLPVPTIAAIDGYALGGGCEC
VLATDLRVATPETRIGLPETRLGIMPGFGGSVRLPRLLGADCALEIIAAGKDVDGLSALK
LGLVDAVVSRDKLRSAALTMLHDAITQQSWQARRAPKLAPLKLSPVEAAMSFTLAKSMVL
QTAGKHYPAPLTAVKTIEAAAGLTRDDALKLETAAFVPLAQSDVARALVGIFLNDQYVKS
LAKKHSARAELPQQAAVLGAGIMGGGIAWQSAWKGVPVILKDISEKALTLGMNEASKLLN
KQLARGKIDGAKLAAVLTTIQPVLEYSGFRRADVVVEAVVENPAVKAKVLAETEQQLRDD
AILASNTSTIPISELAKALQRPQNFCGMHFFNPVPRMPLVEVIRGEQTSEATISKVVAWA
SKMGKTAVVVNDCPGFFVNRVLFPYFAAFSLLLRDGADYRQIDKAMEQQFGWPMGPAWLL
DVVGIDTAHHAQQVMAQGFPARMQKNYRDAIDVLFDAGRFGQKNGLGFYRWEQDKKGKPQ
KIHDPDADTLLSSVSEPARAFSNEEIINRMMLPMLHEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNVVDQARRYAHLGALYTLPEALVQRAHAHQSWYPAVQPID
EASLQRA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgataccttttcattacactggctcgaagacggcgttgccgagctg
gttttcgatgctcccggctcggtcaataaacttgatattaaaaccgtcgccagcctggga
gaggcgctgaatgtattgcagcagcagcccggtctgcgcggtctgctgttaagctccgcc
aaacccgcttttatcgtcggcgcggatatcaccgagtttctttcgctgtttgatgcccct
gaagagaaactgagcgcgtggctgacctttgctaacagcatttttaaccggctggaagat
ctgccggtgccgaccattgccgccattgatggctatgcgctggggggtggctgcgagtgt
gtgctggcaaccgatctgcgcgtcgcgacgccggagacgcgtattggcctgccggaaacc
cggctcggcatcatgccaggctttggcggtagcgtgcgtttgccgcgcctgctgggagcc
gactgcgcgctggagatcattgccgccggcaaagatgtggatggattaagcgcgctgaag
ctgggtctggtcgatgccgtggtcagccgcgacaaactgcgcagcgccgcgctcactatg
ctgcacgacgccattacccagcagagctggcaggcacgccgggcgccgaagctggcgccg
ctgaagctgagtccggttgaagccgcgatgagctttacgctggcgaaaagcatggtgctg
cagacggcaggtaaacactaccctgccccgctgacagcggtgaaaacaattgaagctgcc
gccgggctgacgcgcgatgatgcgcttaagcttgaaacggctgcgtttgtgccgctggca
cagagcgatgttgcccgcgcgctggtcggcattttccttaacgatcaatatgtcaaaagc
ctggcgaaaaaacatagcgcccgcgcagagctgccgcagcaggccgccgtgctgggtgcc
ggcatcatggggggcgggattgcctggcagtcagcgtggaaaggcgtacccgttatcctg
aaagatatcagtgaaaaagcgctgacgctgggtatgaatgaagccagcaagctgctgaat
aagcagctggcgcgcggcaaaattgatggtgcgaaacttgctgccgtgctgacaactatc
cagccggtgctggagtatagcggtttccgccgcgctgatgtggtggtagaagcggtagtg
gagaatccggcggtcaaagcgaaagtgctcgctgagaccgaacagcagctgcgggacgat
gccattctcgcctccaacacctcaaccatcccgattagcgaactggcgaaagcgctgcag
cgtccgcaaaatttctgcggtatgcactttttcaatccggtaccgcgcatgccgctggtg
gaagtgatccgcggcgaacagacctcagaagcgaccatcagtaaggtggtggcgtgggcc
agcaaaatgggaaaaacagcggtcgtggttaacgattgtcccggtttctttgttaaccgg
gtactgttcccctattttgcggctttcagcctgctgctgcgcgacggcgctgattatcgc
cagattgataaagccatggagcagcagtttggctggccaatggggccggcgtggctgctg
gatgtggtcggtatcgataccgcccatcatgcgcagcaggtcatggcgcagggctttccg
gcgcgcatgcagaaaaactatcgggatgccatcgatgtcctgtttgatgcgggccggttt
gggcagaaaaacggcctcggcttctaccgctgggaacaggataaaaaaggcaaaccgcag
aagatacacgatccggacgccgatacgctgctgagcagcgtcagtgaaccagcacgcgca
ttcagcaatgaagagattatcaaccgtatgatgctgccgatgctgcatgaagtggtgcgc
tgtctggaagagaagattatcgcctcaccggcagaagcagatatggcgctggtctatggc
ctcggcttcccgccattccgcggcggcgctttccgctatcttgatacgctcggtaacagc
aatgtggtcgaccaggccagacgctacgcacatctcggcgcgctttatacgctgccggag
gcgctggtgcagcgtgcgcacgcgcatcagagctggtaccccgccgttcaacctattgat
gaagcgtcgctgcagcgcgcctga
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