Pantoea sp. PSNIH1: PSNIH1_06915
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Entry
PSNIH1_06915 CDS
T03464
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pant03021
]
PSNIH1_06915
Transcription machinery [BR:
pant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSNIH1_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
HTH_3
UCR_14kD
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AIX49979
LinkDB
All DBs
Position
1435833..1436690
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANNWPVLTAEEEKALAERLHYQGDLDAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVDMVARELGVSTKDVLEMESRMAAQDM
TFDMSSDDEAGDGKPMAPVLYLQDKTSDFADGIEEDNWDAHAADKLSDAMLSLDERSQHI
IRARWLDDDNKTTLQELADRYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagcgattgctcctctgggcaacctggaatcttacgtt
cgggctgccaacaactggccggtattgacggcagaagaggaaaaagcactggctgagcgg
ctgcattaccagggcgatctggatgcagcgaaaacgctgatcctgtcacacctgcgcttt
gttgttcacatcgcacgtaactatgcaggttatggtttgccacaggcggatctgattcag
gaaggcaacatcggcctgatgaaagcggtgcgccgttttaatccggaagtgggcgtgcgc
ctggtctcatttgcagtgcactggatcaaagcagagatccacgagtacgtgctgcgcaac
tggcgcattgtcaaagtcgctactaccaaagcgcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaatcaggatgaagttgacatggtggcgcgtgaa
ctcggcgtcagcacgaaagatgtgctggagatggagtcgcgtatggcggcacaggacatg
acctttgatatgtcctctgacgatgaggcgggcgacggcaagccaatggctcccgtactc
tacctgcaggataaaacatcagacttcgctgacggtatcgaagaggataactgggacgcc
cacgcagcggataagctgagtgatgcgatgctcagcctggatgaacgcagtcagcatatc
atccgtgcccgctggctggatgatgacaataaaaccacgctgcaggagctggccgaccgc
tatggcgtttcagcagagcgcgtgcgtcagctggaaaagaatgcgatgaaaaagctgcgc
atggcgattgaagcctga
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