Pantoea sp. PSNIH1: PSNIH1_08060
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Entry
PSNIH1_08060 CDS
T03464
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_08060
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSNIH1_08060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_14
RecA
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
Rad51
AAA_24
NTPase_1
AAA
AAA_16
nSTAND3
Zeta_toxin
NACHT
cobW
AAA_30
Viral_helicase1
AAA_29
Beta-prop_BBS7
DZR
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIX50186
LinkDB
All DBs
Position
1672141..1673523
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AA seq
460 aa
AA seq
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MAKAAKRAFVCNECGADYPRWQGQCSACHAWNTITEVRIAASPAAARNERLSGYAGNAGS
SRVQKLSEISLEALPRFTTTFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQVMCKLA
ESMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEQEEPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGMREVSNPSAIFLSRGDEITSGSSV
MVVWEGTRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDVVIFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPAGNAPKKTIDGMKVYSAKKLADALAILDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaagcggcaaaacgcgccttcgtgtgtaacgaatgcggcgcagactatccgcgc
tggcaggggcaatgcagcgcctgccacgcctggaacaccatcaccgaggtgcgtattgct
gcctcgcctgccgctgcgcgcaatgagcgcctgagcggctatgcaggtaacgccggcagc
agccgggtgcagaagctctcggagattagccttgaggcgctgccgcgcttcaccaccacc
tttaaagagtttgaccgcgtcctgggcggcggcgtggtaccgggcagcgctatcctgatt
ggcggcagccccggtgccggtaaatcgacgctgctgctgcaggttatgtgcaagctggcg
gagagcatgaagacgctctatgtcaccggcgaggagtcgctgcagcaggtggcgatgcgc
gcgcaccggctgggactgcccacggacaacctgaatatgctgtcggaaaccagtattgag
cagatctgcctgattgccgagcaggaagagccgaagctgatggttatcgactccatccag
gtgatgcacatggcggatattcagtcttctcccggcagcgtggcgcaggtgcgggagacc
gccgcctatctgacgcgttttgccaagacgcgcggcgtggcgattatcatggtcggccac
gtcaccaaagatggctcgctggcaggtccgaaagtgctggagcactgtatcgactgctcg
gtgctgctggatggcgatgccgactcgcgctttcgcacgctgcgcagccataaaaaccgt
tttggtgcggtgaatgagctgggcgtattcgccatgacggagcagggaatgcgtgaggtc
agcaacccttcagctattttcctgtcgcgcggcgatgagatcacttcaggcagttcggtg
atggtggtgtgggaaggtacccggccgctgctggttgagatccaggcgctggtggatcac
tcgatgatgggcaatccgcgccgcgtagcggtagggctggagcagaaccgtctggcgatt
ttactggcggtactgcatcgtcatggcggcctgcaaatggcggatcaggatgtgtttgtt
aacgtggtaggcggcgtaaaagtcacggaaaccagtgccgatctggcgctgctgctggcg
atggtctccagcctgcgcgatcgccctctgccgcaggatgtggtgatctttggtgaagtc
gggctggcaggtgagatccggccggtaccgagtggccaggagcgtatctctgaagcagcc
aagcacggctttaagcgcgccatcgtgccggccggcaacgcgccgaagaaaaccattgat
ggcatgaaggtttacagcgcgaagaagctggcagatgcgctggccattctggatgagctg
taa
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