Pantoea sp. PSNIH1: PSNIH1_08215
Help
Entry
PSNIH1_08215 CDS
T03464
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant00220
Arginine biosynthesis
pant00240
Pyrimidine metabolism
pant00250
Alanine, aspartate and glutamate metabolism
pant01100
Metabolic pathways
pant01110
Biosynthesis of secondary metabolites
pant01240
Biosynthesis of cofactors
Module
pant_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PSNIH1_08215 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PSNIH1_08215 (carB)
00220 Arginine biosynthesis
PSNIH1_08215 (carB)
Enzymes [BR:
pant01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PSNIH1_08215 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AIX50216
LinkDB
All DBs
Position
1708401..1711628
Genome browser
AA seq
1075 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALKVAEEVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVDLDDADA
LTRIRRELKDAGSDRIWYVADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREG
VNALDAGFLRALKRKGFADARLAALAGVAESEIRKLRQQYNLHPVYKRVDTCAAEFSTDT
AYMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVATLEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDEVDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSSEIQNVMRQQVEKLAFELNVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLLEQGVTEEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFGKAMLGAQSNMKKSGRALLSVREGDKKRIVDL
AAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADPTEKVTSVQEMHAQLKGK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacataaaatctatcctgatccttggcgctggcccgatcgttatc
ggtcaggcgtgtgaatttgactactcgggcgcgcaggcgtgtaaagcgctgcgtgaagag
ggctatcgcgtcattctggttaactccaatccggcgaccatcatgaccgacccggaaatg
gctgacgcgacctatattgagccaatccactgggaagtggtgcgcaaaatcatcgaaaaa
gagcgcccggatgcagtactgcctaccatgggcgggcagaccgcgctgaactgtgcgctg
gagctggagcgccagggcgtgctggaagagtttggcgtgaccatgattggcgccacggct
gacgctatcgataaagctgaagatcgccgtcgctttgacgtggcgatgaaaagcatcggt
cttgataccgcccgttcgggtatcgcccacacgatggaagaggcgctgaaggtcgcggag
gaggtcggtttcccgtgcattattcgtccctcctttaccatgggcggcaccggcggcggt
atcgcttacaaccgcgaagagtttgaagagatctgtgagcgcggcctcgacctctctccg
accaacgagctgctgattgatgaatcgctgattggctggaaagagtatgagatggaggta
gtgcgcgataaaaatgataactgcatcatcgtctgttcaattgaaaacttcgacgccatg
ggcattcacaccggcgactccatcactgtggcaccggcgcagacgctgacggacaaagag
taccaaatcatgcgtaacgcctcgctggcggtgctgcgtgagattggtgtggaaaccggc
ggctctaacgttcagttctccgtaaatccgaaagatggtcgtctgatcgtaatcgaaatg
aacccgcgcgtatcgcgctcctccgcgctggcgtccaaagccaccgggttcccgattgct
aaagtcgcggctaagctggcggtgggctttacgctcgatgagctgatgaacgatatcact
ggcggtcgcacgccggcgtcgtttgaaccctcaatcgactatgtcgtgactaagatcccg
cgctttaactttgagaaatttgcgggtgccaacgatcgcctcactacacagatgaaatca
gtgggtgaagtgatggcgattggccgtaccttccaggagtcgatgcagaaagcgctgcgc
ggccttgaagtcggcgctaacggcttcgatccaaaagtggatctggatgacgccgacgcg
ctgacccgtatccgccgcgagctgaaagacgctggttcggaccgcatctggtatgttgct
gacgcgtttcgtgccggtatgtcggtggatggcgtatttaatctcaccaacatcgatcgc
tggttcctggtacagattgaagagctggtgcgtctggaagagcaggttgcacgtgaaggc
gttaacgcgctggatgccggcttcctgcgcgcgctgaagcgtaaaggttttgctgatgcg
cgtctggcagcgctggcgggtgtggcagaaagcgaaatccgtaagctgcgtcagcagtac
aatctgcatccggtctataagcgggtggatacctgtgccgctgagttctcgaccgatacc
gcctacatgtattccacctatgaggaggagtgcgaagcgaacccgaatcaggatcgtgac
aaaatcatggtgctgggcggcggaccaaaccgtatcgggcagggtattgagtttgactac
tgctgcgtccacgcatcgctggcgctgcgtgaagatggttatgaaaccatcatggttaac
tgcaacccggaaacggtctcaaccgattatgacacctccgatcgcctctactttgagccg
gttacgctggaagatgtgctggagattgtacgaattgagcagccaaaaggcgttatcgtg
cagtatggtggccagacgccgctgaaactggcgcgtgcgctggaagcggccggtgtaccg
gttatcggtaccagcccggacgccattgaccgcgctgaagaccgcgagcgtttccagcag
gcggtggatcgtctgaaactgaaacagccggctaacgccacggttgccacgctggagcag
gcggtagagaaagctgccggtatcggttatccgctggtggtacgtccttcctatgtactg
ggcggccgtgcgatggaaatcgtctatgacgaagtggatcttaagcgctatttccagacc
gcagtatccgtctctaacgatgcgccggtgctgctggatcgcttccttgatgatgcggtg
gaagtcgatgtggatgccatctgcgacggcgagcgggtgctgattggcggcatcatggaa
catattgagcaggcgggtgttcactccggcgactcagcctgttccctgccagcctatacg
ctgagcagcgagatccagaacgtgatgcgtcagcaggttgagaagctggcgtttgaactt
aacgtacgcggtctgatgaacgtgcagtttgcggtcaaagataacgaggtttacctgatt
gaggtgaatccgcgtgcggcacgtaccgttccatttgtctccaaggctaccggcgtaccg
ctggccaaagtggcggctcgcgtcatggcgggcaaaaccctgctggagcagggcgtgacg
gaagaggtcattccgccttactactcggtgaaagaggtggtgctgccgttcaataaattc
ccgggcgtcgatccgattctgggaccggaaatgcgctccaccggtgaggtgatgggcgtc
ggccgtacctttgctgaagccttcggtaaagcgatgctgggcgcgcagagcaacatgaag
aaaagcggtcgtgcgctgctctcggtgcgtgaaggcgataaaaagcgcatcgtcgatctg
gcggcgaagctgcagaagtttggctttgagctggacgctacccacggtacggcggtggtg
ctgggtgaagccggtatcaatccacgcctggtcaataaggtgcatgagggacgcccgcat
attcaggatcgcctgaagaacggtgaatacacctatattgttaacaccacggcgggacgt
caggcgattgaagactctaagctgattcgccgcagcgcgctgcagtataaagtgcattat
gacaccacgctgaacggcggcttcgcgactgcgatggccctgaatgcggatcccactgag
aaagtgacttcagtacaggagatgcatgcgcagctgaaaggcaaataa
DBGET
integrated database retrieval system
