Pantoea sp. PSNIH1: PSNIH1_08300
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Entry
PSNIH1_08300 CDS
T03464
Name
(GenBank) transcriptional regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_08300
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSNIH1_08300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Mga
Rrf2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AIX50231
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Position
complement(1732120..1733781)
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AA seq
553 aa
AA seq
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MSSARLQQQFIRLWQQCEGQDRATTLDALASSLHCSRRHMRNLLQAMQREGWLTWQAEAG
RGKRSQLRFRCTGLALQQQRAEALLEQDGIDQLVQLVGDKAQVRQMIAAHLGRSVRQGKH
ILRVLYYRPLQNLLPASPLRRSETHLARQIFSGLTRINEENGEIEPDIAHHWQQLSAQQW
RFYLRPAIRFHHGRELEMADILDSLQRSAALPLFAHISQLHSPAPWTLDITLTQPDSWLP
WLLGSVSAMILPREWPSLPDFARQPAGCGPYSVVRNQQTQLKIAAFDDYFGYRALIDEVS
IWVLPEVSDELVYSGVKLQGSEADEIAEESRLEEGCYFLLFDQRSAWGRHARFRRWVSDL
LNPITLLHHADPGYQRYWFPAWGLLPRWHHRRDLRAADKPEGLTRLTLSWYSDHVEHEGI
ASALRPLLAQQGVELITRVVSYEAWFAGAGESDIWLGSVNFTLPLEYALFAQLYELPLMQ
HCIPLAWHEDAARWREKRLPLAEWARQLVDQDWLHPLFHHWLLLEGQRSMRGVRLNTLGW
FDFKSAWFAPPAL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggcccgtctgcagcagcaatttattcgtctctggcagcagtgtgaaggtcag
gatcgggcgacaacgcttgatgcactggccagcagtctgcactgttcgcggcgccatatg
cgcaacctgcttcaggcgatgcagcgtgaaggctggctgacctggcaggctgaggcggga
cgcggaaagcgttcgcagctgcgcttccgctgtaccggtctggcgctgcagcagcagcgt
gcagaagcgctgctggagcaggacggtattgaccagctggttcagctggttggcgacaaa
gcgcaggtgcggcagatgattgccgcccacctgggccgcagcgtgcgtcagggaaaacat
attctgcgcgtgctttactaccgtccgctgcagaacctgctgcccgcctcgccgctgcgc
cgctcggaaacgcatctggcccgccagatcttcagcggcctgacgcgcataaatgaggaa
aacggggaaattgaacccgatattgctcatcactggcagcaactctccgcgcagcagtgg
cgcttttatctgcgtccggccatccgctttcatcacgggcgcgagctggagatggcagat
attcttgattcgctgcagcgcagcgccgctctgccgctgtttgcgcatatctcgcagctg
cactcgccggcgccctggacgctggatatcactctgacccagcctgacagctggctgcca
tggctgctgggcagcgtcagcgccatgatcctgccgcgcgaatggccgtccctgcccgac
tttgcccgtcagcctgccggctgcggcccttacagcgtggtacgcaatcagcagacgcag
ctgaaaattgccgcgtttgatgactactttggttaccgggcgctgattgacgaagtctca
atctgggtgctgccggaagtcagtgacgagctggtctactctggcgtaaaactgcagggc
agcgaggcggatgagatagcggaagagagccgtctggaggagggctgctacttcctgctg
tttgaccagcgctccgcctggggacgccatgcccggttccgccgctgggtcagcgatctg
cttaatccgattaccctgctgcatcatgccgatcccggctatcagcgttactggtttcct
gcctggggcctgctgccgcgctggcaccatcgccgcgatctgcgggcggcggacaagccg
gaaggtctgacccggctgacgttaagctggtacagcgaccacgtcgagcatgaaggcatc
gccagcgcgctgcgtcccctgctggcgcagcagggggtggaactgatcacccgggtggtg
agctacgaagcgtggtttgccggcgccggagagagcgatatctggctcggcagcgttaac
ttcaccctgccgctggagtatgcgctgtttgcgcagctctatgagctgccgctgatgcag
cactgcattccgctggcgtggcatgaggatgctgcgcgctggcgtgagaaacgcctgccg
ctggctgagtgggcgcgccagctggtagatcaggactggctgcatccgctgtttcaccac
tggctgctgctggaaggccagcgcagcatgcgcggcgtacggctgaatacgctgggctgg
ttcgattttaaatctgcctggtttgcgccgccggcgttatga
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