Pantoea sp. PSNIH1: PSNIH1_09270
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Entry
PSNIH1_09270 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_09270
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSNIH1_09270
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
TetR_N
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AIX50408
LinkDB
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Position
complement(1945609..1946631)
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AA seq
340 aa
AA seq
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MITMLDVARKAGVSKATVSRVLAGTRYVSKATQQKVFQAIEETGYRPNLLARSLATQKSQ
NIGLIVTHSLFNGPYFSELLYQTATLTNNYGRQLILADGKTSADDERAAIEFLLDLRCDA
IIIYPRFLDTAALEALIEQHAIPIMVVNRQLTQHAEHCVWATHQQNTFDAVRYLIQRGHQ
DIAFITGLPGSPTAAARLAGYQQALAAHQLPFEPGRVIQGAWTSLSGQLATQQLLASQIA
FSALMASNDDMAMGAALALHEAGKRLPQDVSLVGFDDINMAAFFLPPLTTVHVPVAEMIQ
HTLAQLVAMLEGKPVSVLPPFSGRLIERASVADGPARRDQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgattacaatgctggatgtggcccggaaggctggcgtctctaaagccaccgtatcgcgc
gtactggcgggtacgcgctacgtcagtaaagcgacacagcagaaagtatttcaggcgatc
gaagagaccggctatcgtcctaacctgctggcacgcagtctggcaacgcagaagtcacag
aatattggtctgattgtcacccattccctgttcaatggcccctatttcagcgagctgctt
tatcagaccgccaccctgaccaataactacgggcgccagctgattctggcggacggtaaa
accagcgccgacgatgaacgggcggccattgaatttctgctcgatctgcgctgtgacgcg
atcattatctatccgcgctttctggatacggccgcgctggaagcgctgattgagcagcac
gccattccgattatggtggtaaaccggcagctgacgcagcatgcagaacactgcgtctgg
gccacacatcagcagaatacctttgatgccgtacggtatctgatccagcgcgggcatcag
gatatcgcctttattactggcctgccgggctcgcccaccgctgccgcacggctggcgggc
tatcagcaggcgctggctgcccatcagctaccctttgagcctggccgggtcatccagggc
gcatggacctcgctcagcggtcagctggccacacagcagctgctggcgtcgcagatcgcg
ttcagcgcgctgatggcgagtaatgacgatatggcgatgggcgcggcactggcgctgcac
gaggctggaaaacggctgccgcaggatgtctctctggtgggtttcgatgacattaatatg
gccgccttttttctgccgccgctgaccacggtacatgtgccggttgctgaaatgatccag
cacacgctggcgcagctggtcgccatgctggaaggcaagccggttagcgtgttaccgccc
tttagcgggcggctgattgaacgcgcgtcggttgctgacggacccgcgcggcgcgatcag
tag
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