Pantoea sp. PSNIH1: PSNIH1_09370
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Entry
PSNIH1_09370 CDS
T03464
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_09370
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSNIH1_09370
Archaeal homologous recombinant proteins
PSNIH1_09370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIX50426
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All DBs
Position
complement(1964518..1965735)
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AA seq
405 aa
AA seq
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MRIIHTADWHLGQFFYSKSRAAEHQAFLDWLLRQIAEHQVDALIVAGDLFDTGSPPSYAR
EMFNRFVVALQPSGCQLVVLAGNHDSVATLNESRELLACLNTRVITSATPGSEQQVLTLT
QRDGSPGALLCAIPYLRPRDILRSRAGQSGRDKQLSLLQAIEQHYQHCYSAAVAERERLD
EPLPIVATGHLTTVGVTKSDAVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQRIAGTEH
IRYSGSPIPLSFDESGRDKSVWLLDFGRTLESVTALTIPAFQPMQMLKGSMAEIEAQLAQ
FARYEGSLPVWLDIEITTQEYLTDLQRRIEQLTATLPVEVLLVRRSRALRQRSLERLTNE
TLSELKVEEVFARRLAQESELDAQQSDGLTRLFRSALAALEDPSA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcataccgcagactggcacctcggtcagtttttttacagcaagagtcgc
gccgccgaacaccaggcttttcttgactggctgctccggcaaattgctgagcatcaggtt
gatgcactgatcgtggcaggcgatctgtttgataccggttcgccccccagttacgcccgt
gaaatgtttaaccggtttgtggtcgcgctgcagcccagcggctgtcagctggttgtgctg
gcgggcaatcacgattcagtcgccacgctgaatgagtcgcgcgaactgctggcctgcctt
aacacccgggtgatcaccagcgctacccccggcagtgaacagcaggtgctgacgctgacg
cagcgcgacggatcgccgggcgcgctgctgtgcgccatcccctatctgcgcccgcgcgat
attctgcgcagtcgggccggtcagtccggtcgcgacaagcagttatcgctgctgcaggcg
atcgagcagcattaccagcactgctatagcgccgccgtggcagaaagagaacggctggat
gagccgctgccaatcgtcgccaccggccacctcactaccgtgggcgtgaccaaaagcgac
gcggtacgcgatatctatatcggcacgctggatgcgtttccggcgcaggcgtttccgccc
gcagactacattgcactcggccatattcaccgtgcgcagcggattgccggcacggaacat
attcgctacagcggctcaccgatcccgctcagttttgatgagagcggacgtgataaaagc
gtctggctactcgattttggccgcacgctggagagcgtaaccgcgctgaccatacccgcc
tttcagccgatgcagatgctaaaaggttcgatggcagagattgaggcgcagctggcacag
tttgcccgctatgagggatcgctgccggtatggctggatatcgagatcaccacgcaggag
tacctcaccgatctgcagcggcgtattgaacagctcacggccacgctgccggtagaggtg
ctgctggtgcgccgcagccgcgcgctgcgtcagcgcagcctggaacggctgacaaatgag
acgctgagcgaactgaaagtcgaagaggtttttgcccgtcgcctggcacaggagtcagag
ctggacgcgcagcagagtgacggactgacccgcctgtttcgcagcgcgctggccgccctg
gaggatccatccgcatga
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