Pantoea sp. PSNIH1: PSNIH1_10730
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Entry
PSNIH1_10730 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K21972
MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_10730
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PSNIH1_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlrA_C
MlrA_helical
MerR_1
MerR
HTH_17
HTH_Tnp_1
HTH_23
HTH_28
Terminase_5
MerR_2
Motif
Other DBs
NCBI-ProteinID:
AIX52158
LinkDB
All DBs
Position
complement(2244607..2245341)
Genome browser
AA seq
244 aa
AA seq
DB search
MALYSIGDVAERCGINPVTLRAWQRRYGLLKPQRTEGGHRQFDDEDVQRIEEIKRWIESG
VPVGKVKALLEGETVNVHDGWTALQEELMSVLRHVRASKLRTKIATIGREHPIDALIDHV
FVPVRQRLGLDQNTARTMCSLLDGAIIDYVAFCLAGARKKPGKDALIIGWAVEDRTRIWL
EAWRLAQHGWRMDVLAEPLDMPRPELFPGQHLFIWTGKRPTRRQQEQFEHWQAQGFSIQM
HEPA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggccttatacagtatcggcgatgttgccgagcgctgtggaataaacccggtaacactt
cgcgcctggcagcgacgttacggtctgttaaagcctcagcgcaccgaaggtggtcatcga
caatttgatgatgaagatgttcagcgtatcgaagagattaaacgctggatagagagcggc
gtgcccgtcggtaaagtaaaagcgctgcttgagggtgaaacggtcaacgtgcacgacggc
tggactgcgctgcaggaagagctgatgagcgtgctgcgccacgtccgcgcgtcaaagctg
cgcaccaagattgccaccatcggtcgtgagcatccgattgatgcactgatcgatcacgtt
tttgtgccggtacgccagcgtctgggtctcgatcaaaacactgcccgcacgatgtgcagc
ctgctggacggcgctatcatcgattacgtcgcgttttgtctggcgggtgcccgcaaaaaa
ccaggtaaagatgcgctgattatcggctgggccgtggaagatcgcacccgaatctggctg
gaagcctggcgtctggcacagcacggctggcgcatggatgtgctggctgaaccgctggat
atgccgcgccctgagctctttccgggacagcatctgtttatctggaccgggaaacggcca
acgcggcgtcagcaggagcagtttgaacactggcaggcgcaggggttttccatacagatg
cacgaaccggcttaa
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integrated database retrieval system
