Pantoea sp. PSNIH1: PSNIH1_11110
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Entry
PSNIH1_11110 CDS
T03464
Name
(GenBank) amino acid ABC transporter permease
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSNIH1_11110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pant02000
]
PSNIH1_11110
Transporters [BR:
pant02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSNIH1_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
AAA_22
RsgA_GTPase
MMR_HSR1
AAA_29
TMEM_230_134
nSTAND1
DUF6249
Motif
Other DBs
NCBI-ProteinID:
AIX50744
LinkDB
All DBs
Position
complement(2322246..2323961)
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AA seq
571 aa
AA seq
DB search
MCSLMPFLRLFRQHPWRLGLGIALAILTLLASVSLLTLSGWFLAASSLAGLAGLYTFNYM
LPAAGVRGAAIIRTAARYFERLVSHDATFRVLQHLRVYTFSRLMALAPEQLSRFRHGELL
NRFVSDVDTLDHLYLRIISPLAGAAVVIIVVTCSLSLLSLPLALLLGGSMLLTLLLLPAL
FCYFGQASGARIARSQASWRLQLAGWLMAQAELKIYGAATAWRQRLDSTEQQWQHAQQQQ
HHLQAFAQSLLLLIAGLTVTLLLWVSVASVGGATIALFLFCGLAAFEALAPVAGAFLPLA
QVSSAARRVQEIIDQPPAIHFPSAMQDTAPGISLTLDNVSFSYPQRPEPVLAHFSLQLRQ
GERIALLGPTGCGKSSLLALITRSREATAGSIQLNDTPLAQWDEISLRQRISVVTQRVHL
FSQTLRDNLLLALPTASDSELTAALAQAGLGFLAEQPDGLDSWMGEGGRPLSGGELRRLA
IARALLHNGDLWLLDEPTEGLDATTEQQILQLLLRVSKGKTLIVVTHRLQGLEKMDRICV
MDQGAIVESGSHDELISKAGRYWRFRQRFAL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgtgctcattaatgccttttctgcgtctgttccggcagcacccctggcgcctgggattg
gggatcgcgctggctatcctcaccctgcttgccagtgtgagcctgcttacgctctcgggc
tggtttctggctgcctcctcactggcagggctggccggactctataccttcaactatatg
ctgccggcggcaggcgtgcgcggtgccgcgattatacgcaccgccgcgcgttattttgag
cgtcttgtcagtcatgacgccactttccgggtgctgcagcatctgcgtgtctacaccttc
agccgcctgatggcgctggcaccagagcagctgtcgcgctttcgtcacggcgagttgtta
aatcgttttgtcagcgatgtcgatacgctcgatcatctctacctgcgtattatttcgccc
ctggccggtgcggcagtggtcattatcgtcgtaacctgcagtctctctctgctcagcctg
cctctggcgctgctcttaggcggcagcatgctgctgaccctgctgctgctgcccgccctc
ttctgctattttggtcaggcttccggcgcgcgtatcgcccgttctcaggcgagctggcgg
ctgcagcttgccggctggctcatggctcaggctgagctaaaaatctatggtgcagcaacg
gcctggcgtcagcggctggacagcacagagcagcagtggcagcacgcgcagcaacagcag
catcacctgcaggcgtttgcgcagagcctgctgctgctgatagccggtctgaccgtaacg
ctgctgctgtgggtgtcagttgcttctgtcgggggcgcaacgattgcgctgtttctgttc
tgtggcctggcagcgtttgaagcgctggcaccggttgccggcgcttttctgccgctggcg
caggtcagcagcgctgcacggcgcgtgcaggagattatcgaccagccgcctgccatccat
tttccgtcagccatgcaggatacggcgccgggtattagcctcacgctggataacgtttca
tttagctatccgcagcgcccggagccggtattagcgcatttttcactgcagctgcggcaa
ggcgaacgtatcgctctgctcggtccgaccggctgcggtaaatcgagcctgctggcgctt
atcacccgcagccgggaggccaccgccgggagtattcagcttaatgacactccgctcgca
cagtgggatgagatcagtctgcggcagcgtatcagcgtggtgacgcagcgcgtgcatctt
ttcagccagacgctgcgggacaacctcttactggcgcttcccacggccagtgacagtgag
ctgactgccgctctggcgcaggccgggctcggctttctggctgaacagcctgacggactg
gatagctggatgggtgaaggcggcagacccctttccggcggcgaactgcggcgcctggcc
atcgcccgcgccctgctgcacaatggcgatctctggctactggatgaacccactgaaggg
ctggacgccacgaccgagcagcagattctgcaattactgctgcgggtcagcaagggtaag
acgctgattgtggtgacacatcgcctgcagggtctggagaagatggatcgcatctgcgta
atggatcagggcgccattgtggaatcaggttctcatgacgaattaatctcaaaagcgggt
cgctactggcgtttccgtcagcgctttgcgttatag
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