Pantoea sp. PSNIH1: PSNIH1_11250
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Entry
PSNIH1_11250 CDS
T03464
Name
(GenBank) peptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pant01002
]
PSNIH1_11250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pant01011
]
PSNIH1_11250
Peptidases and inhibitors [BR:
pant01002
]
Cysteine peptidases
Family C82
PSNIH1_11250
Peptidoglycan biosynthesis and degradation proteins [BR:
pant01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSNIH1_11250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AIX50772
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Position
2363151..2364962
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AA seq
603 aa
AA seq
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MLLSKTFRFNRMALVFSVVLAGLPLAAGQAAQTASMTAGGHGTTSVAASQQQILQAFSAS
DRPFYLPGLAGLYAARGMAPLWQDRDTVQAFQQQLAEVALSGVQPQFSRWVERLTDPDIK
GFARDVVLSDAMLGYLQFVAGVPAQGETWLYGNVPYRLTMPSLSAINQWQNAVNAGGSRA
FVASLQPQHPQYQPMHAALKTLLTDNRPWPQLRDKATLRPGQVSDDVPALREILQRTGML
TASDHATTPAPDEDAVPAGAVPVAESQPVAVSPSATSVTDLPAPTPQPAGNILAGSPSAA
GNIYDTALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMRASLLALNIQRLRLLPDDM
HNGIMVNIPNYSLTYYNNGSTVLSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVR
QDIVPKVKQDPGYLYRHGYTLLSGWSADAEVIDPTMINWQMVSAASFPYRIRQAPGATNS
LGRYKFNMPSSDAIYLHDTPNHGLFQRDIRALSSGCVRVNKASDLANLLLQDAGWNDSRI
SSTLKQGDTRYVPIRHRIPVNLYYLTAWVSDDGQAQYRTDIYNYDNTARSGSQVLARAGQ
LLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgagtaaaacgttcagatttaatcgcatggcgctggtgtttagtgtcgtgctg
gcaggcttgccactggccgcggggcaggctgcacaaaccgccagcatgacagccggcggg
cacggcaccacgtcagtggcggccagccagcagcagatcctgcaggcattcagcgccagc
gatcgccctttttacctgccgggtctggcgggtctttatgccgcgcgcggaatggcgccg
ctctggcaggaccgcgatacggtgcaggcgtttcagcagcagctggctgaggtcgcgctt
tcaggcgtgcagccacagttcagccgctgggttgagcggctgaccgatccggacattaaa
ggctttgcgcgcgacgtggtgctgagcgatgccatgctgggttacctgcagtttgtggcg
ggcgtaccggcgcagggtgaaacctggctttatggcaatgtgccttacaggcttaccatg
ccgtcgctgtcagcaatcaatcagtggcagaacgcggttaacgctggcggcagccgcgcg
tttgtggcctcactgcagccgcagcatccgcagtatcagccgatgcatgcggcgctgaag
acgctgctgacggataatcgtccctggccgcagctgcgtgacaaagcgacgctgcgtccg
gggcaggtcagcgatgatgtgccggcgctgcgggaaattcttcagcgcaccggtatgctg
accgcatctgaccacgccactacgcctgcaccggatgaagatgcagtgccggcgggcgcc
gtgccggttgctgaaagccagccggtggcagtaagtccttccgccaccagcgtcaccgat
cttccggccccgacgccgcagccggcaggaaatatactggccggatcgccttctgcagcc
ggcaatatctatgacactgcgctggttgagggcgtgaagcgctttcagcactggcagggg
ctggcggatgacggcgcaattggcccgcgcacccgcgagtggctcaatgtctccccgcag
atgcgcgcctcactgctggcgctgaacattcagcgtctgcggctgctgccggatgatatg
cataacgggataatggtgaatattcccaactattcgctgacctactataacaacggcagc
acggtgctctcatcgcgggttattgtcggacggcccgatcgcaaaacgccgcttatgcgc
agtgcgctgaacaacgtggtgctcaatccgccgtggaacgtgccaaccacgctggtgcgt
caggatattgtgccgaaggtgaaacaggatcctggttatctctaccggcacggctatacg
ctgctgtcaggctggagcgctgacgctgaagtgatcgacccgacgatgatcaactggcag
atggtttctgctgccagcttcccgtatcgcatccgtcaggcaccgggcgccaccaattca
ttgggacgttataagtttaatatgcccagttcagacgccatctatctgcacgatacgcca
aaccacggcctgtttcagcgcgatattcgcgcactcagctccggctgcgtacgcgtaaat
aaagcctccgatctggctaacctgctgctgcaggatgctggctggaacgacagccgtatt
tccagcacgctgaagcagggtgacacgcgctatgtgccgattcggcatcgtatcccggtc
aatctgtactatctgaccgcctgggtcagcgatgacgggcaggcgcaatatcgtacagat
atttacaattatgataatacggcgcgctccggcagccaggtgctggcccgggcaggacag
ctcctgctgtag
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