Pantoea sp. PSNIH1: PSNIH1_11550
Help
Entry
PSNIH1_11550 CDS
T03464
Name
(GenBank) hypothetical protein
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_11550
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PSNIH1_11550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_13
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
AIX50825
LinkDB
All DBs
Position
2427488..2428123
Genome browser
AA seq
211 aa
AA seq
DB search
MKNDEKKPRRRSQAATAKRAAILQAALALFSQFGIHGISLDRVAEGAEVSKTNLLYYYPS
KEVLYVAVLKEILDVWLAPLRALRADQDPLTAIRHYIRLKLEVSRDHPQASRLFCLEMLQ
GAPLLRGELAGDLKALVESKAAIVEQWISAGQLAAVQPQHLFFMLWATTQHYADFASQVE
AVTGQTLQNPDFFAQTLQNVERMIIEGIRVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgatgagaaaaaaccgcgccgtcgttcgcaggcggcgaccgcaaaacgcgcc
gctatcctgcaggcggcgctggcgctgttttcccagttcggtattcatggcatcagcctt
gaccgggtggctgagggagcagaggtgtcaaaaacgaatctgctctactattacccttca
aaggaagtgttgtatgtcgccgtgctgaaagagattctggatgtctggctggcaccgctg
cgcgcgctgcgcgccgaccaggatcccctgacggccattcgccactatattcgcctgaag
cttgaggtctcccgcgatcatcctcaggcatcgcggctgttctgtctggagatgctgcag
ggcgcaccactgctgcgtggtgaactggcgggcgacctgaaagcgctggtagagagtaag
gcggcaatagtcgagcagtggatcagcgccggacagctggctgccgttcagccgcagcat
ctcttttttatgctctgggccaccacgcagcactatgctgactttgcctcgcaggttgag
gcggtcaccgggcagacgctgcagaatcccgacttttttgcacagacgttgcagaacgta
gagcggatgattatcgaaggcattcgcgtgcgctaa
DBGET
integrated database retrieval system
