Pantoea sp. PSNIH1: PSNIH1_11875
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Entry
PSNIH1_11875 CDS
T03464
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pant03009
]
PSNIH1_11875
Enzymes [BR:
pant01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PSNIH1_11875
Ribosome biogenesis [BR:
pant03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSNIH1_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
AIX50882
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All DBs
Position
2489334..2490290
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AA seq
318 aa
AA seq
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MKTENPGVHFVAITAENAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKL
EDGDEVRVPPVRVAEREEQAVSPKLDKVAALADAILYEDDHLLVLNKPSGTAVHGGSGLS
FGVIEGLRALRPDARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV
RGDWPSHLKVVQAPLLKNILQSGERVVRVSAEGKPSETRFKVEERFGLATLVKASPVTGR
THQIRVHTLHGGHPIAFDDRYGDREFDRQLAGTGLSRLFLHAAALTFTHPATGETLRMEA
PLDAALRHCLTRLRQKKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagagaatcccggcgtacattttgtcgccatcacggctgaaaatgccggacaa
cgtatagacaactttttgcgcacccagctcaaaggggtgccaaagagcatgatttatcgc
attctgcggaaaggcgaagtgcgggtaaataaaaaacgcgtgaagcctgaatataagctt
gaggatggcgatgaagtccgcgtaccaccggtgcgggtcgcagagcgggaagagcaggcc
gtgtcgccaaagcttgataaagtcgcggcgttagcggatgccattctgtacgaggacgat
catctgctggtgctgaataagccgtccggtacggcagtacacggcggcagcggcctgagc
tttggggttattgaagggctgcgggcactgcgtccggatgcgcgttttctggagctggta
caccggctggatcgcgacacctcaggcgtattgctggtggctaagaagcgttcggcgctg
cgctcattgcatgagcagctgcgtgaaaaggggatgcagaaagattatctggcgctggta
cgcggcgactggccttctcatctgaaagtggtgcaggctccgctgctgaaaaacattctg
cagagcggagagcgggtagtgcgcgtcagcgcagaaggcaagccttcagaaacccggttc
aaagtagaagagcgttttgggctggcgacgctggttaaagccagcccggtgaccggccgc
acgcatcagatccgcgtgcataccctgcatggtggccatccgatcgcctttgacgatcgc
tatggcgatcgcgaatttgatcgtcagctggctggcacggggttatcgcgcctgtttctg
cacgcggcagcgctgacgtttacgcatcctgccaccggcgaaacattacgcatggaggcg
ccgctggatgcggcactcagacactgcctgaccagactgcggcagaaaaaaagctga
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