Pantoea sp. PSNIH1: PSNIH1_12875
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Entry
PSNIH1_12875 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_12875
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PSNIH1_12875
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AIX51065
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Position
2690536..2691459
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AA seq
307 aa
AA seq
DB search
MYHREPPSEQQNPLLPGYPFNAWLVAGLTPINAQEPLDFFIDRPLGMKGYILNLTIRGKG
RVFDGESAFDCEPGDLLLFQPKTPHYYGRSPDSPCWHHRWVYFRPRAYWIDWLEWQEQKQ
GVGRLRLTEALCGEFDRLFASIEQTHNSGRRFAEELAMNLLERLLLRAVEEDPRSHQQIR
DPRVIEACQYVTNHLASEVKIEEVARHVCLSPSRLAHLFREQMGINLLRWREDQRVIRAK
LLLQTTQEPIASVGREVGYDDQLYFSRVFRKRTGVSPSDFRRRSQDAHDALEAQQNWPEP
GRAISFS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatcgcgaaccccccagtgaacaacagaaccccctgctgccgggctatccgttt
aacgcctggctggtcgcgggactcacgccgattaacgcgcaggagccgctcgattttttt
atcgaccgcccgctggggatgaagggctatattcttaacctcaccattcgcggtaaaggc
cgggtttttgacggcgaatccgcctttgactgtgagccgggcgatctgctgctgtttcag
ccgaaaacaccccattattatggacggtcgcccgacagcccgtgctggcaccatcgctgg
gtctatttccggccgcgcgcctactggattgactggctggagtggcaggagcagaagcag
ggcgtgggccggctgcgcctgactgaagcgttatgcggcgagtttgatcgcctgtttgcc
agtattgagcagacccacaattccggtcgccgctttgctgaagagctggccatgaacctg
ctggagcgtctgctgctgcgcgcggtggaagaggatccgcgcagccatcagcagattcgc
gatccgcgcgtaattgaagcctgccagtacgtgaccaaccatcttgccagcgaagtcaaa
attgaggaggtggcacggcatgtctgtttatctccttcgcggctggcgcatctgtttcgc
gaacagatgggcattaatctgctgcgctggcgagaagaccagcgggtgatccgcgccaag
ctgctgctgcagaccacgcaggagcctatcgcctccgtggggcgggaagtgggctatgac
gatcagctctacttttcacgcgtgtttcgcaaacgcacaggcgtcagcccgagtgatttt
cgccgccgcagccaggatgcgcacgacgcgcttgaagcacagcagaactggccggaaccc
ggccgggcgatctctttcagctga
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