KEGG   Pantoea sp. PSNIH1: PSNIH1_13050
Entry
PSNIH1_13050      CDS       T03464                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
pant  Pantoea sp. PSNIH1
Pathway
pant02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pant00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSNIH1_13050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pant02044]
    PSNIH1_13050
Secretion system [BR:pant02044]
 Type IV secretion system
  Trb secretion system protein
   PSNIH1_13050
SSDB
Motif
Pfam: TrbI DUF4307
Other DBs
NCBI-ProteinID: AIX51096
LinkDB
Position
complement(2732734..2734017)
AA seq 427 aa
MSQDDTPDLAAPQAAGKIAPEAVALRAQPRPVTRLNRRTLAILAGVLAVAVLGAVMWSLQ
PQRRGAGEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPAVPELGPPLPGDLGPAIVKS
QQPATAAYAAPGHDPNDALRKEAEAAAASSVFFRSGGQNAAPVAQTQVAAAPGFAANAVF
DPLAAGPVSTAAQPADPTAVQNRQDHKEAFLKGGSTETRNSGNLTLPTSPYQVMAGTVVA
GALVTGIKSDLPGDVIATVTEPVYDTASGRFLLIPQGSRILGKYNSQVSYGQSRVQVVWN
RIILPDTSSLTLDNLAGTDPAGYAGLEDDVDYHWGRIFAGAALTTLLGVGAELAAPENRQ
DGDRVIIAGRDSAQDSINQVGQEMTRRNLNIQPTLTQRPGLPVRIIVNRDLVLRRYQPLF
FNRGTSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgagccaggatgacactcccgaccttgccgcgccgcaggcggcgggcaagatcgctccc
gaggcggtcgcgcttcgcgcccagccgcgcccggtcacgcgcctgaatcggcgcacgctg
gccatcctcgccggcgtcctggcggtggccgtgctcggcgcggtgatgtggtcgctgcaa
cctcagcggcgcggtgcgggcgagcagaccgagctttacaacgtcgatcgtgtctcgaag
tctgaaggactggatgcgctgccgacggactactccaagctgccgccggcgttgccgcct
gccgttcccgaactggggccgccgctgccgggcgatcttggcccggccatcgtgaagtcg
cagcagccggcgacggccgcctacgcggcccccggccacgacccgaacgatgctctgcgc
aaagaagccgaagcggccgcggcctcgtccgtgttcttccgctcgggagggcagaatgcg
gcgccggtggcgcagacacaggtggccgctgcgccgggcttcgccgccaatgcggtgttt
gacccgctggcggccgggccggtctccacggcggcccagcctgctgacccgacagcggtg
caaaaccggcaagaccataaagaggctttcttgaaaggtggctccactgaaacccgtaat
tccggcaatctgaccctgccaacttcgccgtatcaggtcatggccggaacggtggtcgca
ggtgccttggtgacggggattaagtcggacttgcccggcgacgtgatcgccacggtgacg
gagccggtctatgacacagcctccgggcgcttcctgctgattccgcagggttcgcgcatc
ctgggcaaatacaacagccaggtcagctacgggcagagccgcgttcaagtcgtctggaac
cggatcatcctgccggacacgtcttcgctcacgctcgacaacctggccggcaccgaccca
gccggctatgccgggctggaggacgatgtggactaccactggggccgcatctttgccggt
gcggcactcaccacgctgctgggcgtcggtgccgagctggccgcgccggagaaccggcag
gatggtgatcgcgtcatcatcgctgggcgcgacagcgcgcaggacagcatcaatcaggtc
ggccaggagatgacccggcgcaacctcaacatccagccgaccttaacgcaacggccgggc
ctgccggttcgcatcatcgtcaaccgggatctggtgctgcggcggtaccagccgctgttc
ttcaaccgggggacttcacgatga

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