Pantoea sp. PSNIH1: PSNIH1_13975
Help
Entry
PSNIH1_13975 CDS
T03464
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSNIH1_13975
Enzymes [BR:
pant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PSNIH1_13975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS
PAS_4
PAS_8
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AIX51251
LinkDB
All DBs
Position
2937397..2939379
Genome browser
AA seq
660 aa
AA seq
DB search
MTDEQGQTLLYALFGTTSPHWRLTSDSDALHFAEDENANTNLAVSLTPAQASLLRAMTVI
TSSINLTLPLHGTPVPMHFVGRKVNQSTWAGTASAWGDTSSVARDLTQGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLKEQEVIGRNVFQLFMTRQEAQASRRNITGFFRDG
NSYEVERWVKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQISLALELANGSQTGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLGKDQTLARLGGDEFVVLAEHTSQAALEAMSSRILERLRQPFRIGLIEVYSGCSIGI
SLAPLHGEDRESLIRNADTAMYHAKENGRGKFCIFTSEMNKRVFEYLWLDTNLRKALEQD
HLVVYYQPKVDRDGEVRSAEALVRWNSPERGMVSPGDFIPYAEESGLIVPLGRWVMLNVL
QQIIKWRSEGIFLRVAVNVSAKQLIDQSIYSDLKNALGEAGLTESPIDIELTESCLIENE
AGALKLMKQFQELGAQVHLDDFGTGYSSLSQLARVPIDAIKLDQSFVRDINKQPVSQSLV
RAIVAVAKALELQVIAEGIETKAEEKFVLTNGVDGRQGYFYAKPMPAEQLGHWLKHPARV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaggggcaaaccttgctgtatgccttgtttggcaccaccagcccccat
tggcggttaacctctgacagtgacgcactgcattttgccgaagatgaaaatgccaatacc
aatctggccgtttcgcttactccggcgcaggccagtctgttacgggcgatgacggtgatc
acctccagcattaatcttactctgccgctgcacggaaccccggtgccaatgcactttgtc
ggacgtaaagtgaaccagtctacctgggccggcaccgcctctgcatggggtgatacgtcg
tcggttgcccgcgatctcacccagggactctctttcgccgaacaggtggtatctgaagct
aactcggttatcgttatcctcgaccagcgcggtaacattcagcgctttaatcgtttgagt
gaagagtataccggcctgaaagagcaggaagttatcggtcgtaacgtctttcagctattt
atgacccggcaggaggcgcaggcttcacgccgtaatatcaccggttttttccgcgacgga
aattcgtatgaagttgagcgctgggtcaaaaccaaaaagggtcagcgactgtttctgttc
cgtaataagttcgttcacagcggcagcgggaaaaatgaaattttcctcatctgttccggt
acggatatcaccgaagagcgacgggcacaggagcggcttcgggtgctggcaaataccgat
acggtcacgggtttgcctaatcgtaacgctattcaccagcaaattagcctggcactggag
ctggcgaacggttctcagaccggcgtggtctacctcgatctcgacaattttaaaaaggta
aatgacgcttacggtcatatgttcggcgatcagctgctgcaggcggtatcgctggctatc
ctcagctgcctgggcaaagatcagacgctggcgcgtcttggcggcgatgaatttgtggtg
ctggctgagcataccagtcaggcggcgctggaggcgatgtcgtcgcgtatccttgagcgg
ctgcggcagccctttcgcatcgggcttattgaggtttacagcggctgttctatcgggatc
tcactggctcccctgcatggcgaagatcgcgaaagcctgatccgcaatgcggatacggcc
atgtatcatgccaaagagaatggccgcggcaagttctgcatcttcaccagcgaaatgaac
aagcgggtctttgaatacctctggctcgataccaatctgcgtaaagcgctggagcaggat
cacctggtggtctattaccagcctaaggtcgatcgcgacggcgaggtgcgcagcgccgaa
gcgctggtacgctggaactctccggaacgcggcatggtctcgcccggcgactttatcccc
tatgccgaagagtccggtctcattgtcccgctgggccgctgggtcatgcttaatgtgctg
cagcagattataaagtggcgcagtgaaggcatttttctgcgcgttgccgtcaacgtctcc
gcgaaacagcttatcgatcagagcatctacagcgatctgaaaaatgcgctgggcgaagcg
gggctgacggaatccccgatcgatattgaattaactgaaagctgcctgattgagaatgaa
gcgggtgcgcttaagctcatgaaacagtttcaggagcttggggcgcaggtacatcttgat
gactttggcaccggctactcctccctttctcagctggcacgggtacccattgatgccatt
aagctggatcagagttttgtccgggatatcaacaaacaaccggtttcgcaatctttagtg
cgcgcgattgtggcggttgccaaagcccttgagctgcaggtgattgcagagggtattgaa
accaaagcggaagagaaatttgttctcactaacggtgtggatgggcgccagggctatttt
tacgccaaaccaatgcccgcagaacagctcgggcattggctgaagcatcctgcccgtgtt
taa
DBGET
integrated database retrieval system
