Pantoea sp. PSNIH1: PSNIH1_14200
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Entry
PSNIH1_14200 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pant03036
]
PSNIH1_14200
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_14200
Chromosome and associated proteins [BR:
pant03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
PSNIH1_14200
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSNIH1_14200
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6626
PaaX_C
DUF3037
IL15
Shikimate_DH
Chp1-like_PIN
DUF4288
Motif
Other DBs
NCBI-ProteinID:
AIX51294
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All DBs
Position
2986224..2986631
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECSLETLEEMLEKLDVVVNERREEESHAQAENAERSRKLEQ
YREMLLADGIDPNELLNALSENKTVTKARRAARPAKYSYVDENGESRTWTGQGRTPAVIK
KAIEEDGKQLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaatccttaataatatccgtacattgcgtgctcaggctcgcgaa
tgctctctggaaaccctggaagagatgcttgaaaaacttgacgtagtggttaatgagcgt
cgtgaagaagagagtcatgctcaggctgaaaatgctgaacgcagccgcaaactggagcag
tatcgcgaaatgctgctggctgacggcatcgatcctaatgaactgctgaacgcattatca
gaaaacaaaacggtgaccaaagcgcgtcgcgctgcccgtcccgccaagtacagctatgta
gatgaaaacggtgaaagccgcacctggaccggtcagggccgcacgcctgccgtaattaaa
aaagcgattgaagaagatggtaaacagctggacgatttcctgctgtaa
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