Pantoea sp. PSNIH1: PSNIH1_14250
Help
Entry
PSNIH1_14250 CDS
T03464
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSNIH1_14250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_14250
Enzymes [BR:
pant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSNIH1_14250
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSNIH1_14250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AIX51302
LinkDB
All DBs
Position
2994205..2995011
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAALVEQHQPEVIGLQETKVHDEMFPLEEVSQLGYHVFYHGQK
GHYGVALLTKNAPVRVMRGFPGDDADAQRRLIMAEIPSPAGNITVINGYFPQGESRDHPL
KFPAKEKFYRDLQSYLMEHAAADKPVLIMGDMNISATDLDIGIGEESRKRWLRTGKCSFL
PEEREWMDRLLQWGLTDTWRARNPTKNDRFSWFDYRSRGFDDNRGLRIDLLLASQPLAAR
CVDAGIDYAIRGMEKPSDHAPVWATFDL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtttcattcaacatcaacgggttgcgcgcccgccctcatcagctggccgcg
ctggtggaacagcatcagcctgaggttatcggcctgcaggaaaccaaggttcacgatgag
atgttcccactggaagaggtcagccagctcggctaccacgtcttctatcatgggcaaaaa
ggtcactacggcgtcgcgctacttaccaaaaacgcaccggtacgggtcatgcgcggtttt
ccgggcgatgacgctgacgcccagcgacgcctgattatggcggagataccgagcccggca
ggtaacatcaccgttatcaacggctatttcccgcagggtgaaagccgcgaccacccgctt
aaattcccggctaaagagaaattctaccgcgatctgcagagctatctgatggagcacgct
gccgctgacaagccggtgctgatcatgggcgacatgaatatcagcgccactgacctggat
atcgggattggtgaggagagccgcaagcgctggctgcgtaccggaaaatgctcgtttctg
ccggaagagcgtgagtggatggatcggctgctgcagtggggtcttaccgatacctggcgc
gccagaaacccgacgaaaaacgatcgcttttcctggttcgactaccgctcgcgcggattt
gatgacaaccgcggactgcgcatcgatctgctgctggccagtcagccgctggccgcgcgc
tgcgtcgatgccggtatcgattacgccattcgcggcatggaaaaaccttctgaccatgct
cccgtctgggcgacgttcgatctgtaa
DBGET
integrated database retrieval system
