Pantoea sp. PSNIH1: PSNIH1_16345
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Entry
PSNIH1_16345 CDS
T03464
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_16345
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PSNIH1_16345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
DUF7577
zf-tcix
SLFN-g3_helicase
AAA_16
AAA_22
Zn_Ribbon_1
DZR
T1R_D3-like
Motif
Other DBs
NCBI-ProteinID:
AIX52218
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Position
3440040..3441794
Genome browser
AA seq
584 aa
AA seq
DB search
MAFTLRPYQQEAVDATVAHFRRHTTPAMIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHSKYQAYGLEADIFAAGLQRRQSEGKVVFGSVQSVARNLDRFDSAFSLVIVDECH
RISDNEESQYQQLFSHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLVPQNSGLFREADLNRELKQQQRVTPQ
IIRQIVEFADDRRGVMIFAATVEHAREILSLLPENSALVSAETAVKERDRLIQQFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPDKRDCLILDYAGNPH
DLFTPEVGTPKGASDNQPVQVFCPACGFANTFWGKATEDGHVIEHFGRRCQGILEDDEGG
REQCDFRFRFKSCPDCGAENDIAARRCQQCDKILVDPDDMLKAALKLKDARVLRCSGMTL
AHGRDDKGEWLKATYYDEDGSDVSERFRLQTPAQRKAFEQLFMRPHQRAPGVELGWQQAA
DVVALQPLLRHPDFVVARARGQFWQVREKVFDYQGRFRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacacttcgtccctatcaacaggaagcggttgatgcaaccgttgcccacttc
cggcgccataccacgccggcgatgattgtgctgcccaccggtgccggtaagagcctggtc
attgctgaactggcgcggctggcgcgtggccgggtgctggtgctggcgcacgtcaaagag
ctggtcgagcagaaccacagcaagtatcaggcttacgggctggaagcggatatttttgcg
gccgggctgcagcgcaggcagagcgaaggcaaagtggtatttggcagcgtacagtccgtg
gcgcgcaaccttgaccgcttcgacagcgccttttcactggtaattgtcgatgagtgtcat
cgcatcagcgacaatgaggagagccagtatcagcagctcttcagccacctgcgccagcat
aatccacagctgcgcctgctgggactgaccgccacgccgttccggctgggcaaaggctgg
atctatcaattccactatcacggcatggtacgcggcgatgaaaaagcgctgtttcgcgac
tgcatctacgagctgccgctacgctacatgatcaaacacggttttctggtgccgccggaa
cgtcttgatatgccggtggtgcagtatgacttcagccggctggtgccgcagaacagcggc
ctcttcagggaagcggatcttaaccgtgagctgaaacagcagcagcgcgtcacgccacag
attatccgccagatcgttgagtttgccgacgatcggcgcggcgtaatgatcttcgccgcc
acggttgaacatgcgcgcgaaattctgtcgctgctgccggagaacagcgcgctggtatcg
gcagaaaccgcggtgaaagagcgtgaccggctaattcagcagttcaaagcgcagcagctg
aagtttctggttaacgtggcggtactgaccaccggcttcgacgcaccgcacgtggattta
atcgcgattctgcgcccgactgaatccgtcagcctctatcagcagatagtcggacgcgga
ctgcgcctggctccggataaacgcgactgcctgatcctcgactacgccggtaatccgcac
gatctctttacgccggaagtgggtacgccaaaaggcgccagtgacaaccagccggtacag
gtgttctgccctgcctgcggctttgcgaataccttctggggaaaagccaccgaagacggg
catgtgattgagcactttggtcgccgctgtcagggtattctggaggatgatgagggcggt
cgtgagcagtgcgatttccgctttcgcttcaaaagctgccctgactgcggcgctgaaaat
gatatcgccgcacgacgctgccagcagtgcgacaaaattttggtcgaccccgatgatatg
ctgaaagcggcgctgaagctaaaagatgcgcgggtgctgcgctgcagcggcatgacgctg
gcgcatggccgtgatgacaagggcgaatggctgaaagcgacctattacgacgaggatggc
agcgacgtcagcgaacgcttccggctgcagacgcccgcgcagcgaaaagcatttgagcag
ctgtttatgcgcccgcaccagcgcgcgcctggcgtagagctgggctggcagcaggcggcc
gacgtggtcgcgctgcagccgctgctgcggcatcctgactttgtggtggcgcgtgcccgg
ggacagttctggcaggtgcgggagaaagtgtttgattaccaggggcgcttccgccgcgcc
aatgagctgcgctag
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