Pantoea sp. PSNIH1: PSNIH1_16415
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Entry
PSNIH1_16415 CDS
T03464
Name
(GenBank) ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSNIH1_16415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pant02000
]
PSNIH1_16415
02044 Secretion system [BR:
pant02044
]
PSNIH1_16415
Transporters [BR:
pant02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSNIH1_16415
Secretion system [BR:
pant02044
]
Type I secretion system
Adhesin protein transporter
PSNIH1_16415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_28
ATP-synt_ab
Dynamin_N
NACHT
AAA_22
SMC_N
AAA_30
DUF87
AAA_29
MMR_HSR1
Zeta_toxin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIX51689
LinkDB
All DBs
Position
complement(3454416..3456548)
Genome browser
AA seq
710 aa
AA seq
DB search
MRSPLHTRDEAIAALNRAAAALGIATDRRRLQLQWLAAASPQAQLTDLAQHMGLTLQFVS
ARRLRWRQAVMPLLLRLNDGTLALAEAADDEGRVHYWLSAGGDGLRSAPLSDLLAQAQPE
VGVITLATRARDARMDEFVRPWQPHWLWQHFRPMKRRLVEISLASLVSNMLALAGILFSM
QVYDRVIPARSQPTLWVLFGGVMLAALMEYLIRLARTRVADGMGKRIDLALSAQLFARAL
RIRNEARPRSTGAFIAQLREVEQVRELLTSTTVSAAADIPFVVLFLVILSAIGGWLVLVP
LLAIPLIVIPGLLVQIPMARLAKEGQRESALRQALLVETLEGVEDIKALQAEAGFQRQWE
QTHEVSATLASQQRLWGARLTGWAGSVQQLTYAGMLVAGVYLILNNQITTGTLVASSLLS
ARTLAPLMQLTLVFSRWQHARSAMTGLNELLKKPVDQPQSGVPAYAAVLRGHYELQQVRY
HYDESSLRAVAIGSLTIRPGERIAIVGGAGAGKSTLLKILAGQALPDSGRIIIDGVSMQQ
LDPADLRRQLGWLSQDSRLFFGTLRQNLLLGNPHATEQEMLQALRISGALSLLQQDAAAL
DRLIHEGGRGLSGGQRQMILLSRMVLRQPQIVLLDEPTAALDEPLEAQVIRQLAQWLPGR
TLVLVTHRPALLGLVDRIIVMKNGEIVADGPRDDILQRSASRTEVADELR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcacccttgcatacgcgcgacgaagcgattgccgcgctaaaccgggctgcggcc
gcgctggggatcgccaccgatcgccgtcgcctgcagcttcagtggctggccgcggcgtca
ccgcaggcgcagctgacagatctggcgcagcatatggggctgacgctgcagtttgtcagc
gcccgcaggctgcgctggcggcaggccgtaatgccgctgctgctgcgccttaacgacggc
acgctggcgcttgcagaagcggcagatgatgaggggagggtgcattactggctgagcgca
ggcggtgacggcctgcgctcagctccgctgagtgacctgctggcacaggcgcagccggaa
gtcggcgtgattacgctggcgacccgcgcacgggatgcgcgcatggatgagtttgttcgt
ccctggcagccacactggttatggcagcattttcggccaatgaagcgacgcctggtggaa
atcagtctcgcctcgctggtcagcaatatgctggcgctggcggggatcctgttctcaatg
caggtgtacgatcgggtgataccagcccggtcacaacccacgctatgggtgctgtttggc
ggagtgatgctggcggcgctgatggaatatctgatccggctggcgcgtacccgggttgct
gacggcatgggaaagcggatcgatctggctctctctgcgcaactctttgcccgcgcactg
cgcatccgcaatgaggcgcggccgcgctccaccggggcttttattgctcagctgcgtgag
gttgagcaggtacgtgaattactgacctctacgacggtaagtgccgcagcggatatccct
tttgtggtgctgtttctggtgattttatccgcgattggcggctggctggtgctggtgccg
cttctggcgatcccgctgatcgtgatcccggggctgctggtacagatcccgatggcgcgg
ctggctaaagagggccagcgcgaaagtgctctgcggcaggcgctgctggtggagacgctg
gaaggggtagaggatatcaaggcgctgcaggctgaggccgggtttcagcggcagtgggaa
cagacccacgaagtcagcgccacgctcgccagccagcagcggctgtggggcgcgcgtctt
accggctgggcgggcagcgtgcagcagctgacctacgcggggatgctggtcgccggggtc
tatctgatcctgaacaatcagatcactaccggtacgctggtggccagcagcctgctctcc
gcgcgtacgctcgctcccctgatgcagctgacgctggtattttcgcgctggcagcatgcg
cgcagcgccatgaccggacttaatgaactgcttaaaaagccggttgatcagccgcagagc
ggcgtgccggcttatgcggcggtgctccgcggacactatgagctgcagcaggtgcgctat
cactatgatgaaagcagcctgcgtgcggttgctatcgggagcctgacaatccgtcccggt
gagcgcatcgcgattgtcggcggagcgggagccggtaaatcgaccctgctgaaaatcctg
gccgggcaggcactgcccgacagcgggcgcatcataatcgatggcgtcagcatgcagcag
ctcgatccggcagatttgcggcggcagctcggctggctgtcgcaggattcgcgcctgttt
ttcggtacgctgcggcagaacctgctgctgggcaatccgcacgccactgaacaggagatg
ctgcaggcgctgcgcataagcggtgcgttatcgctgctgcagcaggatgctgccgcgctt
gaccgcctcattcatgaaggagggcgcgggctgtctggcggccagcgacagatgattctg
ctcagcagaatggtgctgcgtcagccacagatcgtgctgctggatgagccgacggcggcg
cttgatgaaccgctggaggcgcaggtgatccgtcagctggcgcagtggctgccggggcgt
accctggtgctggtcacgcatcgtccggcgctgctggggctggtcgatcgcatcattgtg
atgaagaacggcgagattgtggctgatggcccgcgcgatgacattctgcagcgcagcgct
tcacggacggaggtagcagatgaattgagataa
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