Pantoea sp. PSNIH1: PSNIH1_16445
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Entry
PSNIH1_16445 CDS
T03464
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pant03032
]
PSNIH1_16445
03400 DNA repair and recombination proteins [BR:
pant03400
]
PSNIH1_16445
Enzymes [BR:
pant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSNIH1_16445
DNA replication proteins [BR:
pant03032
]
Prokaryotic type
DNA Topoisomerases
PSNIH1_16445
DNA repair and recombination proteins [BR:
pant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSNIH1_16445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIX51695
LinkDB
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Position
complement(3466487..3469126)
Genome browser
AA seq
879 aa
AA seq
DB search
MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKISSELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAFIDDENISVEGLMEHITGPDFPTAAFINGRRGIEEAYRTGRGKI
YIRARGEIETDAKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRVEGISGLRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMPLKDIIEAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIEQIRRAPTPAEAKGALLAQAWDLGNV
AAMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAGLIHILQSADRLMEVIREELEAMRDQFGDARRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYTEGFNIFMATASGTVKKTAL
QEFSRPRSAGIIAINLREDDELIGVALTNGNDEAMLFSAGGKVVRFAESAVRAMGRSASG
VRGIRLAENDKVVSLIVPREEGAILTVTQNGYGKRTANSEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVA
EPVEEEELDAIDGSVAEGEEDIAPEVDSDDEAPDAEDDA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaatatcgaagaagagctgaaaaactcc
tacctcgattacgccatgtcggtcattgttggccgagccttacccgatgtccgtgatggc
ctgaagccggtgcatcgccgcgtgctttacgccatgagcgaactgggtaacgactggaat
aaagcctataagaaatctgcccgtgtggtaggtgacgttatcggtaagtatcacccgcac
ggtgactctgctgtatacgaaagtattgtccgtatggcccagccgttctccctgcgctat
atgttggttgacggtcagggtaacttcggttccgttgatggcgactccgccgcagcgatg
cgttataccgaagtccgtatggcgaagatctcctctgagcttctggccgatctggaaaaa
gagacggtcgactttgtgccaaactacgacggcaccgagcagatcccggaagtgctgcca
accaaaattcctaacctgctggtaaacggctcctccggtatcgccgtgggaatggcaact
aacattccgccgcataacctgactgaagtgatcaacggctgcctcgcctttatcgatgat
gaaaacatcagcgtagaagggctgatggagcacatcaccggtccggacttcccgaccgca
gcctttatcaatggccgtcgtggtattgaagaggcctatcgtaccgggcgcggtaaaatc
tacattcgcgcgcgtggcgaaatcgaaaccgatgccaaaaccggtcgcgaaaccattatt
gtcaatgagatcccgtatcaggttaacaaagcgcgcctgattgaaaaaattgccgagctg
gttaaagagaagcgcgttgaagggatcagcgggctgcgcgatgagtctgataaagacggt
atgcgcattgtcattgaagtcaaacgcgacgccgtgggtgaagtggttctgaacaacctc
tattcgctgacgcagctgcaggtctctttcggcatcaacatggtggctctgcatcagggt
cagccgaagatcatgccgctgaaagatatcatcgaagcctttgtgcgccaccgtcgcgaa
gtggtgacgcgtcgcaccatcttcgaactgcgcaaagcgcgcgatcgtgcccatatcctt
gaaggtctggcgattgcgctggcgaatatcgatccgattatcgagcagatccgtcgcgcg
ccgacgccagcagaagcgaagggcgctctgctggcacaggcgtgggatctcggcaatgtt
gccgccatgcttgagcgtgccggcgatgacgctgcgcggccggagtggctggagcctgaa
tttggtattcgcgatggccgctactatcttaccgagcagcaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggccttgagcatgagaaactgcttgatgagtacaaagag
ctgctggagcagattgccgggctgattcacattctgcagagtgctgaccgcctgatggaa
gtgatccgcgaagagctggaagcgatgcgcgatcagtttggcgatgcgcgccgtactgag
atcaccgccaacagcgcggatatcaatatcgaagatctgatcaaccaggaagatgtggtc
gtcaccctgtcgcatcagggctacgttaagtatcagccgctgtcagattatgaagcgcag
cgccgcggcggcaagggtaaatcagccgcacgtatcaaagaagaggacttcattgatcgc
ctgctggtggctaatacccacgacacgattctctgcttctccagccggggtcgtctctac
tggatgaaggtttatcagctgccggaagcgagccgtggcgcacgcgggcgtcctatcgtc
aacctgctgccgctggaagctaacgagcgcattaccgctattctgccggtgcgtgagtat
accgaaggcttcaatatttttatggcgacggccagcggcacggtgaagaaaaccgcgctg
caggagttcagtcgtccgcgcagcgccggcattatcgccatcaacctgcgtgaagatgat
gagctgattggcgtagcgctgaccaacggcaatgatgaagcgatgctcttctccgctggc
ggtaaagtcgtgcgctttgctgagagtgcagtgcgtgccatggggcgttcagcctcaggc
gtgcgcggtatcaggctggcagagaacgataaagtggtgtcgctgattgtgccgcgcgaa
gagggcgcgatcctcaccgttacgcagaatggttacggtaagcgtacggctaacagcgag
tatccgacgaaatcacgtgccactcagggcgttatctcgatcaaagttaccgagcgtaac
ggaccggttatcggtgcggtacaggtggtagatggcgatcagattatgatgatcaccgat
gccggcacgctggtacgcacccgcgtatcggaagtcagcgtggtcggccgtaacacgcag
ggcgtgatcctgatccgcaccgcggaagatgagaacgtggttggcctgcagcgcgtggcg
gagccggttgaagaagaggagctggatgccatcgacggcagcgtggcggaaggcgaagag
gatatcgcgccggaagtcgacagcgatgacgaggcaccggacgcagaagacgacgcataa
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