Pantoea sp. PSNIH1: PSNIH1_p01010
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Entry
PSNIH1_p01010 CDS
T03464
Name
(GenBank) transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pant03000
]
PSNIH1_p01010
Transcription factors [BR:
pant03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSNIH1_p01010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
HTH_7
TetR_N
HTH_Tnp_ISL3
Methyltransf_24
MarR_2
HTH_38
HTH_26
MerR
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJA71075
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Position
pPSP-3a9:complement(123866..124894)
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AA seq
342 aa
AA seq
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MTTITEVAKRAGVSKATVSRVLSGNGYVSQDTREKVYAAIAETGFRPNLLARNLATRSSQ
TIGLVITNTLYSGSYFTEMMQHSARMLEQQGRQLLLVDGKHSAAEERAAIEFLLDLRCDG
VIIYPRFLSIEEMDSIIAQHRHPILVINRRLRQHTSYCIFADQHATSAAAVEQLILLGHR
EIAFITGSLDSPTGRERLAGYQTALAKHGIAFDSARVVEGRWQAEQGVMAIEQLLTQHVR
FSAVVASNDEMAIGALRALAVRGIAVPQQVAVVGFDDIPLAPYTLPALSSVKMPVTEMIH
ETIARLVAMLDGGDIRPGAPHTGTLIRRESLAAGPWLSRATQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccactatcaccgaagtagcgaaacgcgcgggtgtctcaaaagcgacagtgtcacgt
gttctgtcaggtaacggctatgtcagccaggatacgcgggaaaaagtgtatgcggccatc
gctgaaaccggcttccggcccaatctgctggcgcgcaatctggcgacgcgctccagccag
acaatcgggctggtcattaccaatacgctctatagcggcagctactttaccgagatgatg
cagcattcagcgcgcatgcttgaacagcaggggcgccagctgctgctggtggacggcaaa
cacagcgcggcagaagagcgggccgccattgagtttttgctcgatctgcgctgcgatggc
gtcatcatctatccgcgctttctttccatcgaagagatggacagcattattgctcagcac
cggcatccgattttggtcatcaaccgccgcctgcgtcagcataccagctactgcattttt
gccgatcagcacgccaccagcgcggcagccgttgagcagcttattctgctgggtcatcgc
gagattgcgtttatcaccggatcgcttgattcgcctaccggacgcgagcgtctggcgggc
tatcagacggcgctggcgaagcatggcattgcgttcgattcggcacgggtggtggaaggg
cgctggcaggcggaacagggcgtcatggctattgagcagctgctgacgcagcacgtccgc
ttcagcgcggtggtggcaagtaatgatgaaatggcgattggcgcactcagggcgctggcc
gtccgggggattgccgtgccgcagcaggtggcggtggtgggatttgatgatattccactg
gcaccctatacccttccggcgctgtcgagcgtgaaaatgccggtgacagagatgatccat
gaaaccatcgcccgtctggtcgccatgctcgacggcggcgatatcaggccaggcgcgccg
cacaccggcacgcttatccggcgtgaatccctggcggcaggtccctggctatcccgcgcg
actcagtga
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