Papio anubis (olive baboon): 101000120
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Entry
101000120 CDS
T07474
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
panu
Papio anubis (olive baboon)
Brite
KEGG Orthology (KO) [BR:
panu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
panu03021
]
101000120 (SCAF8)
03041 Spliceosome [BR:
panu03041
]
101000120 (SCAF8)
Transcription machinery [BR:
panu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101000120 (SCAF8)
Spliceosome [BR:
panu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101000120 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101000120
NCBI-ProteinID:
XP_031523560
Ensembl:
ENSPANG00000017489
LinkDB
All DBs
Position
6:complement(107352120..107601728)
Genome browser
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPAIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA
PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN
VSSNSEILGVRPSNVSSSSGIIGAQPPNILNNSGILGIQPPSVSSGSGLLGVLPPNIPNN
SGLVGVQPPNIPNTSGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSIDNVANPEK
RIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLG
RDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEK
LTSSNEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatactgtattccctgaatgactataaacca
cccatttcgaaagcaaaaatgacccaaattactaaggccgccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaa
gtacctggactttatgttattgactccattgtgcgacaatccagacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaag
aataatgtatttaaaagtgagattattcagcctcttttggatatggcagctgggattccg
cctcctgttgtcacacctgttttggccagcactaccactgctatgagtaatactccagga
actcctgtgacacctgttactccggccaatgtggtccaaggcttacctgatccgtgggta
tctcagataacaaatacagatacactcgcggctgtggctcagatcttgcaaagtcctcaa
ggccagcagcttcaacaattaatacaaaccttacagatacaacaacagaagccccagcct
tccattctgcaggccctagatgctggtcttgttgttcagttgcaagctcttacggcacaa
cttacagctgcagctgcggctgccaacactcttactcccttagaacagggagtctccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaagaaattccaacttcacaactttctcacgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcagctc
ttggagcagcaacagcctcaaaaggccactcctcaggatagtcaggaaggaacatttggg
tcagagcattcagcgtcaccatcacaagggagtagtcagcagcattttcttgaacctgaa
gtcaatttggatgattccatagatattcagcagcaggatatggatatagatgaagggcaa
gatggagtggaagaggaggtctttgaacaagaagctaagaaagtggcagttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgg
tctggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaag
aggaaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggaaaaagaaagg
cagaaaaagggattacctccaattagatctaaaacactgagtgtatgtagtactactctc
tgggttgggcaagtggacaagaaggcaacacagcaagacttaaccaacctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatg
gttcatcgacaagatgcatttcgagctcttcagaaactcagttctggatcgtataaaatt
gggtccaaggtcattaagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgct
atgttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcattt
cctgtgtcgatgccggttcctcctcctggatttagtccgattcctccacctcctttttta
cgagcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttccccca
cctgttgtgccaccccctgcaattccaccagtagtaccaacatctttagtgcagccgtca
ttatccatgaccccggaaactgtgaaagatgttgggtttggtagccttgttataccgggt
ggctctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgct
ccaactaaacaggcagagcctgaagaaaaagtacctcatctgatagaccaccagatttct
tctggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaatttta
ggaggacagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcaagtaattctgaaattcttggggtccggccatctaatgtttccagtagttctggg
attattggagcccaaccaccaaatattctaaataactctggaatattgggaatacagcca
cccagtgtgtcaagtggttctggacttttgggagtgctacccccaaatatacctaacaat
tctggacttgtaggagtacagccaccaaatattccaaatacttctggacttctgggaaca
cagccaccagctggacctcaaaacttaccccctttaagtatccctaatcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacaggcacctgggccaagattc
cctttaatacagcctggaattccaccccagcggggaatcccacccccatcggtacttgat
tcagctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcagcca
gaaagaccttttttagctcctggaagacaaagcatagacaatgttgctaacccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcct
cctatagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggtt
gggcggcctatagatccaagagaaggtcctggacggcctccactagatggtagggatcat
tttggaagacctcctgtagatataagagagaatcttgtgaggccaggtatagatcatctt
ggtcgaagagaccactttggctttaatcctgagaagccctgggggcatagaggagatttt
gatgagagagagcatcgggttctaccggtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggatagggatgacagagattttgatttctgcagagaaatgaacggaaatcgtcttgga
cgagacagaattcaaaacacttgggttccccctcctcatgctcgggtttttgattatttt
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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