Papio anubis (olive baboon): 101004197
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Entry
101004197 CDS
T07474
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X2
KO
K06100
symplekin
Organism
panu
Papio anubis (olive baboon)
Pathway
panu03015
mRNA surveillance pathway
panu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
panu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101004197 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101004197 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
panu03021
]
101004197 (SYMPK)
03019 Messenger RNA biogenesis [BR:
panu03019
]
101004197 (SYMPK)
Transcription machinery [BR:
panu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101004197 (SYMPK)
Messenger RNA biogenesis [BR:
panu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101004197 (SYMPK)
U7-dependent histone pre-mRNA processing factors
101004197 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
101004197
NCBI-ProteinID:
XP_009193040
Ensembl:
ENSPANG00000019930
LinkDB
All DBs
Position
20:2614547..2664733
Genome browser
AA seq
1274 aa
AA seq
DB search
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISSQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSPSARPGPPSSEEAMDFREEGPECET
PGIFISMDDDSGLTEAALLDSSLEGPLSKETAAGGLTSKEERSPQTLAPIGEDVVKTPSP
AAEDAREPEAKGNS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggcagtggggacagcgtcacccgccggagtgtggcatcacagtttttcact
caagaggaggggccaggaatcgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagaccccacactactggacaacttcctggacgagatcatcgcattc
caagcagacaagtcaatcgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggac
gagaatgtgaacgtggtgaagaaggccatcctcaccatgacccaactttacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctgcaagaggcctgctgggacatg
gtatctgccatggcgggggacatcatcttactgttggactccgacaatgacggcatccgc
acccatgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggctgac
tcggagataccccgacgccaggagcatgatatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaacgtactatgggaagagggcaaggcagccttggagcagctgctt
aagttcatggtgcaccctgccatctcttccatcaacctgacaacagcgctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaact
ctgcatgccaacctgcccccaacgctggccaaatcgcaggtgagcagcgtgcggaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccggcctccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggctgagatcgcccgcaacatgccg
agcagcaaggacacccgcaagcggccccgcgatgactcggactccacactcaagaagatg
aagctggagcccaacctgggggaggacgatgaggacaaggacttggagccaggcccatca
gggacctcgaaggcctcagcccagatctccagccagtcagacacggacatcacagctgag
ttcctgcagcctctgctgacgcctgataatgtggccaatctggtcctcatcagcatggtg
tacctgccggaggccatgccagcctccttccaggccatctacacccctgtggagtcagca
ggcacagaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggactgggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagacggagagcgtcctgatcaagcggcgcctgtcagcccagggccaagccatc
tcggtggtgggctccctgagctccatgtcccctctggaggaagaggcaccacaggccaag
aggaggccagagcccattatccctgttactcagccccggctggcaggcgccggtgggcgc
aagaaaatattccgtctcagcgacgtgctgaagcccctgactgatgcccaggtggaagcc
atgaagctgggcgctgtgaagcggatcctgcgggctgaaaaggctgtggcctgcagcggg
gcagcccaggtccgcataaagatcctggccagcctggtgacacagttcaactcgggcctg
aaggcggaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctatctggccgcgggtgcctcaggctccctggac
aagtatgaggactgccttatccgcctgctgtccggcctgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgctggaggcgccactcatcacagagagtgccctggag
gtgatccgcaagtactgcgaggatgagagtcgcacctacctgggcatgtccacgcttcga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtccttctcgacctc
agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaaacgcatgtat
gagaaggagcagctgcgggagtatgtggagaaatttgccctcaactacctgcagctcctg
gtgcaccccaacccaccatctgtgctgtttggagctgacaaagacacagaggtggcagcg
ccctggacggaggagacagtgaagcagtgtctctacctctacctggctctcctgcctcag
aaccacaagctgatccatgagctggcggccgtgtacactgaagccatcgccgacatcaag
cggacggtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactccccggag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacagacaaagtcccaccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgactgccagacgtccgcttcctcatcccggtgctcaatgggctggagaag
aaagaggtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcatggtgagggaaactcagccttgtccccactg
aaccctggagagctcctgatcgcattacacaacatcgactccgtgaagtgcgacatgaaa
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcagaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcttg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaagtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagccgtctttgacaagtgccctgagctccgggagcctctgctggcccatgtccgc
tccttcaccccccaccagcaagctcatatccctaactccatcatgaccatcttggaggcc
agcggcaagcaggagccagaggccaaggaagcgcctgcggggcccttggaggaggacgac
ctggagcctctggccttggcccccgccccggccccccgtcccccgcaggacctcattggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggagcagaagctgaag
ccgggaggagtgggagccccctcctcttcctcctcctctctctctccctcggcccggccg
ggcccgccctcgtctgaggaagccatggatttccgggaggaggggcctgagtgtgagacc
ccgggcatcttcatcagcatggatgacgactcagggctgaccgaggccgcgctgttggac
tctagtctcgagggccccctatccaaggagacggcagcgggcgggctgacctctaaggag
gagcggagcccccagaccctggcacctattggagaagatgtcgtgaagacccccagcccg
gctgccgaggacgccagggaacccgaggccaaggggaacagctga
DBGET
integrated database retrieval system