Papio anubis (olive baboon): 101009951
Help
Entry
101009951 CDS
T07474
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
panu
Papio anubis (olive baboon)
Pathway
panu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
panu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101009951 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panu04147
]
101009951 (COL18A1)
00535 Proteoglycans [BR:
panu00535
]
101009951 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
panu00536
]
101009951 (COL18A1)
Exosome [BR:
panu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101009951 (COL18A1)
Proteoglycans [BR:
panu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101009951 (COL18A1)
Glycosaminoglycan binding proteins [BR:
panu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101009951 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Fz
Laminin_G_3
DUF1970
Motif
Other DBs
NCBI-GeneID:
101009951
NCBI-ProteinID:
XP_031521742
LinkDB
All DBs
Position
4:180769427..180823550
Genome browser
AA seq
1694 aa
AA seq
DB search
MAPDPSGCRVLLLLFCCLAAAQANLLNLNWLWFNNKDTSQAATTIPEPQGLLPVQPTADT
TTHVVPQDGSTEPATAPGSPEPPSELLEDSQGTPTSAESPDMPEENIAGVGAKILNVAQG
IRSFVQLWNDTVPTESLARAETRVVEAPVGTLALPGPSSTPRENGTTLWPSRGAPSSPGA
HTTEAGTLPAPTPSPPSLGRPRAPLTGPSVPPPSSGRASLSSSLGGAPAWGSLHDPDSQG
LSPTAATPSQQLQHPDVRLRTPLLHPLVTGSLGAHAAPSAFSSGLPGALSQVAVTTLIGD
SGAWVSHAANSVGLGLANNSALLGADPEAPAGRCLPLPPSLPVCGRLGISRSWLPNHLHH
ESSQQVQAAAQVWGGLLRTHCHPFLTWFFCLLLAPPCGRVLLPAPPPCRQFCEALQDTCW
SRLSGGRLPVACASLPTQEDGYCVFIGPAAESVGEEVGLLQLLGDPPPQQITQTDDPDVG
LAYVFGPEANSGQVARYHFPSLFFRDFSLLFHIQPATEGPGVLFAITDSAQAVVSLGVKL
SGVRDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVEGGYVALYVDCEEFQR
MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELKVRRDPQVGPMHCLDEEGDDSD
GASGDFGSGLADTRELLREEMGTALKPRLPTPPPVTAPPLAGGSSTEDSRSEEIEEQTTV
TSLGAQTLPGSDSVSMWDGSVRTPGGRVKEGGLKGQKGEPGIPGPPGRAGPPGSPCLPGP
PGLPCPVSPLGPVGPALQPVPGPQGPPGLPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP
GTPGDVGPKGDKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGK
EGPPGRTGQKGSLGEAGAPGHKGSKGDPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
GLPAGFDDMEGSGGPFWSTARGADGPQGPPGLPGLKGDPGVPGLRGAKGEVGANGAPGFP
GLPGREGTAGPQGPKGDRGSQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGAVLSV
PGPEGRPGFAGFPGPAGPKGDLGSKGERGSPGPKVRGSGAKGEPGSVFSPDGSALGPAQK
GAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDAHLGFGMRGMPGP
PGPPGPPGPPGTPVYDSNVFAESSAPGLPLPPGNQGPPGPKGTKGEVGPPGPPGQFPFDF
LQLEAEMKGEKGDRGDAGQKSEKGVAEWLAAPSLPGPPGPPGPPGYPGIPGPKGESIRGQ
PGPPGPQGPRLAIKRSRPSGPPCAPWASWNHGHLLRVCGCSRLRKVQLEPRTPLPRGTDN
EVAALQPPVVQLHDSNPYPRRESPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVH
LRPALPTSPPAHTHRDFQPVLHLVALNSPLPGGMRGIRGADFQCFQQARAVGLVGTFRAF
LSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFAGSEGPLKPGARIFSFDGKDVL
RHPTWPQKSVWHGSDPSGRRLTESYCETWRTESPSVTGQASSLLGGRLLGQNAASCHHAY
IVLCIENSFMTASK
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggctgccgcgtcctgctgctgctcttctgctgcctggcagct
gctcaggccaacctgctgaacctgaactggctttggttcaataataaggacaccagccaa
gcagctaccacaatccctgagccccaggggctcctgcctgtgcagcccacagcagacacc
accacgcacgtggtcccccaggatggttccacggagccagcgacagcccctggcagcccc
gagccaccctcagagctgctggaggacagccagggtacccccacttctgccgagagcccg
gacatgccagaggagaacattgccggtgtgggagccaagatcctgaacgtggcccaaggc
atccggagctttgtccagctgtggaatgacaccgtccccactgagagcttggcccgggcg
gaaacgcgggttgttgaggctcctgtgggcaccctcgccctccctgggccttccagcacc
ccccgggagaatgggaccactctgtggcccagccgtggcgctcccagctctccgggcgcc
cacacgaccgaggctggcaccctgcctgcacccaccccatcgcctccctccctgggcagg
ccccgggcaccactcacggggccctcagtgccaccaccatcctcaggtagagcttctctc
tcctcctcgctgggcggggcccctgcctggggaagcctgcacgacccggacagccaagga
ctctcgcctaccgcagccactcccagccagcagctccaacaccctgacgtccgcctgcgc
acaccacttctgcaccccctggtgacgggctccctgggcgcgcacgcggccccctctgcc
ttctcctctgggctcccgggtgcactgtctcaggtcgcagttaccactttaatcggggac
agcggtgcttgggtctcccacgcggctaactctgtggggctgggtcttgctaataactct
gccctgctcggggctgaccctgaggcccccgccggtcgctgcctgcccctgccgccctcc
ctgccggtctgtggccgcctgggcatctcgcgctcctggctgcccaatcacctccaccac
gagagcagccagcaggtgcaggccgcggcgcaggtgtgggggggcctgctgcggacgcac
tgccaccccttcctcacctggttcttctgcctgctcctggccccaccgtgcggcagggtc
ctgctgcccgccccgccaccctgccgccaattctgcgaggccctgcaggacacgtgctgg
agccgcctgagtgggggccggctgcctgtcgcctgtgcctcgctcccaacccaggaggac
gggtactgtgtgttcattgggccggctgcagagagcgtcggcgaggaggtggggctgttg
cagctccttggggaccctccgccccagcaaatcacccagacggatgaccccgacgtcggg
ctggcctacgtctttgggccagaggccaatagcggccaagtggcccggtaccacttcccc
agcctcttcttccgcgacttctcactgctgttccacatccagccggccacggagggccca
ggggtgctgttcgccatcacggactcggcgcaggcagtggtctcgctgggcgtgaagctc
tctggggtgcgggacgggcaccaggacatctccctgctctacacggagccaggcgcaggc
cagacccacacagccgccagcttccggctccccgccttcgtcggccagtggacacactta
gcactcagtgtggagggtggctacgtggccctctacgtggactgtgaggagttccagaga
atgccgcttgctcgatcctcacggggtctggagctggagcccggcgccgggctcttcgtg
gctcaggcaggaggagcggaccctgacaagttccaggggatgatcgctgagctgaaggtg
cgcagggacccccaggtgggccccatgcactgcctggacgaggaaggtgatgactcagat
ggggcatctggagactttggcagcgggctcgccgacacccgggagcttctcagggaggag
atgggcacagccctaaaacccaggctccccacgccacccccggtcactgctccacccttg
gctggaggcagcagcacggaagattccagaagtgaagaaatcgaggagcagaccacggtg
acttcattaggagctcagacacttcctggctcagattctgtctccatgtgggacgggagt
gtccggacccctgggggccgcgtgaaagagggcggcctgaaggggcagaaaggggagcca
ggtattccaggcccgcctggccgggcaggccccccaggctccccctgcctgcctggtccc
ccgggtctcccgtgcccggtcagtcccctgggtcctgtaggcccagcgttgcaacctgtc
cccggaccacaaggacctccagggctgccagggagggacggcacccctggaagggatggc
gagccgggtgaccctggtgaagacggaaagccgggcgacaccgggccgcagggcttcccc
gggactccaggggacgtgggccccaagggtgacaagggagaccccggggttggagcgaga
ggacccccaggaccccaagggcctccggggcccccaggaccctccttcagacacgacaag
ctgaccttcattgacatggagggatctggctttggtggtgatctggaggccctgcggggt
cctcgaggcttccccggaccccccggaccgcccggtgtcccaggcctgcccggtgagcca
ggccgctttggggtgaacagttctgacgtcccaggacccgccggccttcctggtgtgcct
gggcgcgagggtccccccgggtttcccggcctcccgggacccccaggccctccaggaaaa
gaggggcccccaggaaggacggggcagaaaggcagcctgggtgaagcaggcgccccagga
cataaggggagcaagggagaccccggtcctgctggcgctcgcggggagagcggcctggca
ggagcccctggacccgctggaccaccaggcccccctgggccccctgggccaccaggacca
ggactccccgctggatttgatgacatggaaggctccggggggcccttctggtcaacagcc
cgaggcgccgatgggccgcagggaccccccggcctgccaggactgaagggggatcctggt
gtgcctggcctgcggggagccaagggagaagttggagcaaacggagcccccgggttcccc
ggcctccctggcagagagggcactgctgggccccaggggccaaagggagacagaggcagc
cagggagaaaagggagatccagggaaggacggagtcgggcagccaggcctccccggaccc
cccggacccccggggcctgtggtctacgtgtcggagcaggatggtgccgtcctgagcgtg
ccgggacctgagggccggccaggtttcgcaggctttcccggacctgcaggacccaagggc
gacctgggctctaagggtgaacgaggctccccgggacccaaggtaaggggctcaggtgct
aagggtgaaccgggcagcgtcttcagccccgacggcagtgccctgggccctgcccagaaa
ggagccaagggagagccgggcttccgaggacccccgggtccgtacggacggccagggcac
aagggagagattggcttccctggacggccgggtcgccccgggatgaacggattgaaagga
gagaaaggggagccgggagatgcccaccttggatttggcatgaggggaatgcccggcccc
ccagggcctccagggcccccaggccctccagggactcctgtttacgacagcaatgtgttt
gctgagtccagcgccccgggcctccctcttcctccagggaatcagggccctccaggaccc
aagggcaccaaaggggaagtgggcccccccggaccaccagggcagtttccattcgacttc
cttcagttggaggctgaaatgaagggggagaagggagaccgaggtgatgcaggacagaaa
agtgagaaaggggtggccgagtggcttgcggctcccagcctgccaggcccccccggtccc
ccaggcccacctggctaccctgggattccaggtcccaagggagagagcatccggggccag
cctggcccacctggacctcagggaccccggctcgctatcaagcgttcccggccctccggg
cccccctgtgccccctgggcctcctggaaccatgggcacctcctcagggtttgcggttgc
agcaggttgaggaaggtccagctggagccccggacgccacttccacgagggacggacaac
gaagtggctgccttgcagccccccgtggtgcagctgcacgacagcaacccctacccccgc
cgggagtccccccaccccaccgcaaggccctggcgggcagacgacatcctggccagcccc
cctcgcctgcccgagccccagccctaccctggagccccgcaccacagctcctacgtgcac
ctgcgtccggcgctccccacgagcccacccgcccacacccaccgcgacttccagcccgtg
ctccacctggttgcgctcaacagcccgctgccaggcggcatgcggggcatccgcggggcc
gacttccagtgcttccagcaggcacgggccgtggggctggtgggcaccttccgtgccttc
ctgtcctcgcggctgcaggacctgtacagcatcgtgcgccgtgccgaccgcgcagccgtg
cccatcgtcaacctcaaggatgagctgctgtttcccagctgggaggctttgttcgcaggc
tctgagggtccgctgaagcccggggcacgcatcttctcctttgacggcaaggacgtcctg
aggcaccccacctggccccagaagagcgtgtggcatggctcggaccccagtgggcgcagg
ctgactgagagctactgcgagacgtggcggacagagtctccctcagtcacaggtcaggcc
tcctccctgctggggggcaggctcctggggcagaatgctgcaagctgccaccacgcctat
atcgtcctctgcatcgagaacagcttcatgactgcctccaagtag
DBGET
integrated database retrieval system