Papio anubis (olive baboon): 101016549
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Entry
101016549 CDS
T07474
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
panu
Papio anubis (olive baboon)
Pathway
panu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
panu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101016549 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panu03019
]
101016549 (XAB2)
03041 Spliceosome [BR:
panu03041
]
101016549 (XAB2)
Messenger RNA biogenesis [BR:
panu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101016549 (XAB2)
Spliceosome [BR:
panu03041
]
Complex B
Other components
Prp19-related factors
101016549 (XAB2)
Complex C
101016549 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
101016549
NCBI-ProteinID:
XP_031515893
Ensembl:
ENSPANG00000023955
LinkDB
All DBs
Position
20:44003525..44014237
Genome browser
AA seq
861 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETAQSWGARRRTMWTWSCAWPASSSSSADVPCCSTASCCAKTHTTCTSG
TSVSPCTRAAPGRSSTPTQRLCRRWTPSRPQASPTLCGWRLPSFTVTTTAGSCEQLCHAR
VILEKATKVNFKQXWMTWQACGVSAGSWSSDTRTTMRPCGCCERPRRCLPAGXEYFDGSE
PVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYF
EESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKT
LYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQK
AIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRH
GNEDTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQ
RAEQLAAEAERDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEP
NEVRLEQQSVPAAVFGSLKED
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagtttaaacagggcgccccgaagcccaggctcaatcagctgtatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacatacccgccgcacctttgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaacgacgagcgtttcgtgtctaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgtgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgccgactactacatccgcagtggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagttcgaggagagcatgatcgccgcaaagatggagaccgcccagagctggggcgcgagg
aggaggacgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgac
gtcccctgctgctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtggc
acaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagagg
ctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcgt
ttgccaagttttacagtgacaactacagctggatcatgtgagcaactctgccatgcccgt
gtcatcctggagaaggccaccaaggtgaacttcaagcagnngtggatgacctggcaagcg
tgtggtgtcagtgcggggagttggagctccgacacgagaactacgatgaggccttgcggc
tgctgcgaaaggccacggcgctgcctgcccgccgggnccgagtactttgatggctcagag
cccgtgcagaaccgcgtgtacaagtcgctgaaggtctggtccatgctcgccgacctggag
gagagcctcggcaccttccagtccaccaaagccgtgtatgaccgcatcctggacctgcgc
atcgcgacaccccagatcgtcatcaactatgccatgttcctggaggagcacaaatacttt
gaggagagcttcaaggcgtacgagcgcggcatctcgctgttcaagtggcccaacgtgtcc
gacatctggagcacctacctgaccaaattcattgcccgctatgggggccgcaagctggag
cgggcgcgggacctgtttgaacaggctctggatggctgtcccccaaaatatgccaagacc
ttgtacctgctgtatgcacagctggaggaggagtggggcctggctcggcatgccatggcc
gtgtacgagcgtgccaccagggctgtggagcccgcccagcagtatgacatgttcaacatc
tacatcaagcgggcagccgagatctatggggtcacgcacacccgcggcatctaccagaag
gccattgaggtgctgtcggacgagcacgcgcgtgagatgtgcctgcggtttgcagatatg
gagtgcaagctcggggagatcgaccgcgcccgggccatctacagcttctgctcccagatc
tgtgacccccggacgaccggcgcgttctggcagacgtggaaggacttcgaggtccggcac
ggcaacgaggacaccatcaaggagatgctgcgtatccggcgcagcgtgcaggccacgtac
aacacacaggtcaacttcatggcctcgcagatgctcaaggtctccggcagcgccacgggc
accgtgtctgacctggcccccgggcagagcggcatggacgacatgaagctgctggaacag
cgggcagagcagctggcggctgaggcggagcgcgaccagccctcgcgtgcccagagcaag
atcctgttcgtgaggagtgacgcctcccgggaggagctggcggagctggcacagcaggtc
aaccccgaggagatccagctgggcgaggacgaggacgaggacgagatggacctggagccc
aacgaggttcggctggagcagcagagcgtgccagccgccgtgttcggcagcctgaaggaa
gactga
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